Evidence map›Paper›PMID 31811277›Full record

ArticleCell research2020

Tissue-specific transcription reprogramming promotes liver metastasis of colorectal cancer.

Shuaishuai Teng, Yang Eric Li, Ming Yang, Rui Qi, Yiming Huang, Qianyu Wang, Yanmei Zhang, Shanwen Chen, Shasha Li, Kequan Lin and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 135 citations in OpenAlex.

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  5. Characterization of Transcriptional, Epigenetic, and Phenotypic Plasticity and Discovery of Biomarkers in Acute and Chronic Murine Schistosomiasis Infection.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
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8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 8 institutions in 2 countries.

Shuaishuai Teng *MOE Key Lab of Bioinformatics, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, 100084, China.
Yang Eric Li *MOE Key Lab of Bioinformatics, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, Beijing, China.
Ming YangMOE Key Lab of Bioinformatics, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, 100084, China.
Rui QiMOE Key Lab of Bioinformatics, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, 100084, China.
Yiming HuangMOE Key Lab of Bioinformatics, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, Beijing, China.
Qianyu WangMOE Key Lab of Bioinformatics, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, 100084, China.
Yanmei ZhangPKU-THU Center for Life Sciences, Tsinghua University, Beijing, China.
Shanwen ChenDivision of General Surgery, Peking University First Hospital, Peking University, Beijing, China.
Shasha LiMOE Key Lab of Bioinformatics, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, 100084, China.
Kequan LinMOE Key Lab of Bioinformatics, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, Beijing, China.
Yang CaoMOE Key Lab of Bioinformatics, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, 100084, China.
Qunsheng JiWuXi AppTec (Shanghai) Co., Ltd., Shanghai, 200131, China.
Qingyang GuWuXi AppTec (Shanghai) Co., Ltd., Shanghai, 200131, China.
Yujing ChengMOE Key Lab of Bioinformatics, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, Beijing, China.
Zai ChangMOE Key Lab of Bioinformatics, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, Beijing, China.
Wei GuoZhejiang University-University of Edinburgh Institute, Haining, China.ORCID http://orcid.org/0000-0002-2226-2613
Pengyuan WangDivision of General Surgery, Peking University First Hospital, Peking University, Beijing, China.
Ivan Garcia-BassetsSchool of Medicine, University of California, San Diego, La Jolla, CA, USA.
Zhi John Lu *MOE Key Lab of Bioinformatics, Center for Synthetic and Systems Biology, School of Life Sciences, Tsinghua University, Beijing, China. zhilu@tsinghua.edu.cn.
Dong Wang *MOE Key Lab of Bioinformatics, Department of Basic Medical Sciences, School of Medicine, Tsinghua University, Beijing, 100084, China. dwang@cdutcm.edu.cn.
Tsinghua University · CNPeking University · CNWuXi AppTec (China) · CNCenter for Life Sciences · CNLudwig Cancer Research · USSichuan University · CNUniversity of California San Diego · USZhejiang University-University of Edinburgh Institute · CN

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DIANE M SIMEONE · 1985 to 2026
$124.9M
NCI NIH HHS P30 CA023100
6 · The paper itself

Abstract

Metastasis, the development of secondary malignant growths at a distance from a primary tumor, is the cause of death for 90% of cancer patients, but little is known about how metastatic cancer cells adapt to and colonize new tissue environments. Here, using clinical samples, patient-derived xenograft (PDX) samples, PDX cells, and primary/metastatic cell lines, we discovered that liver metastatic colorectal cancer (CRC) cells lose their colon-specific gene transcription program yet gain a liver-specific gene transcription program. We showed that this transcription reprogramming is driven by a reshaped epigenetic landscape of both typical enhancers and super-enhancers. Further, we identified that the liver-specific transcription factors FOXA2 and HNF1A can bind to the gained enhancers and activate the liver-specific gene transcription, thereby driving CRC liver metastasis. Importantly, similar transcription reprogramming can be observed in multiple cancer types. Our data suggest that reprogrammed tissue-specific transcription promotes metastasis and should be targeted therapeutically.

Indexed as

Gene Expression Regulation, NeoplasticTranscriptional ActivationAnimalsCell Line, TumorCellular ReprogrammingColorectal NeoplasmsEnhancer Elements, GeneticFemaleHepatocyte Nuclear Factor 1-alphaHepatocyte Nuclear Factor 3-betaHumansLiverLiver NeoplasmsMice, Inbred BALB CMice, NudeOrgan SpecificityHepatocyte Nuclear Factor 1-alphaHepatocyte Nuclear Factor 3-beta

Identifiers

PMID31811277
PMCPMC6951341
OpenAlexW2994475761

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.