Evidence map›Paper›PMID 31809862›Full record

ArticleGenomics, proteomics & bioinformatics2019

Machine Learning to Detect Alzheimer's Disease from Circulating Non-coding RNAs.

Nicole Ludwig, Tobias Fehlmann, Fabian Kern, Manfred Gogol, Walter Maetzler, Stephanie Deutscher, Simone Gurlit, Claudia Schulte, Anna-Katharina von Thaler, Christian Deuschle and 8 more

Open access · goldAbstract read
In one paragraph

Article in Genomics, proteomics & bioinformatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 2 pooled it
4.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 2 syntheses or guidelines pooled it, 82 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 5 institutions in 1 country.

Nicole LudwigDepartment of Human Genetics, Saarland University, 66421 Homburg/Saar, Germany.
Tobias FehlmannChair for Clinical Bioinformatics, Saarland University, 66123 Saarbrücken, Germany.
Fabian KernChair for Clinical Bioinformatics, Saarland University, 66123 Saarbrücken, Germany.
Manfred GogolInstitut für Gerontologie, Universität Heidelberg, 69047 Heidelberg, Germany.
Walter MaetzlerDepartment of Neurology, Christian-Albrechts-University of Kiel, 24118 Kiel, Germany; Center for Neurology and Hertie Institute for Clinical Brain Research, Department of Neurodegeneration, University of Tuebingen, 72074 Tuebingen, Germany; German Center for Neurodegenerative Diseases (DZNE), 72076 Tuebingen, Germany.
Stephanie DeutscherDepartment of Human Genetics, Saarland University, 66421 Homburg/Saar, Germany.
Simone GurlitDepartment of Anesthesiology and Intensive Care, St. Franziskus Hospital Muenster, 48145 Muenster, Germany.
Claudia SchulteCenter for Neurology and Hertie Institute for Clinical Brain Research, Department of Neurodegeneration, University of Tuebingen, 72074 Tuebingen, Germany; German Center for Neurodegenerative Diseases (DZNE), 72076 Tuebingen, Germany.
Anna-Katharina von ThalerCenter for Neurology and Hertie Institute for Clinical Brain Research, Department of Neurodegeneration, University of Tuebingen, 72074 Tuebingen, Germany; German Center for Neurodegenerative Diseases (DZNE), 72076 Tuebingen, Germany.
Christian DeuschleCenter for Neurology and Hertie Institute for Clinical Brain Research, Department of Neurodegeneration, University of Tuebingen, 72074 Tuebingen, Germany; German Center for Neurodegenerative Diseases (DZNE), 72076 Tuebingen, Germany.
Florian MetzgerDepartment of Psychiatry and Psychotherapy, University Hospital Tuebingen, 72016 Tuebingen, Germany.
Daniela BergDepartment of Neurology, Christian-Albrechts-University of Kiel, 24118 Kiel, Germany; Center for Neurology and Hertie Institute for Clinical Brain Research, Department of Neurodegeneration, University of Tuebingen, 72074 Tuebingen, Germany; German Center for Neurodegenerative Diseases (DZNE), 72076 Tuebingen, Germany.
Ulrike SuenkelCenter for Neurology and Hertie Institute for Clinical Brain Research, Department of Neurodegeneration, University of Tuebingen, 72074 Tuebingen, Germany; German Center for Neurodegenerative Diseases (DZNE), 72076 Tuebingen, Germany.
Verena KellerDepartment of Medicine II, Saarland University Medical Center, 66421 Homburg/Saar, Germany.
Christina BackesChair for Clinical Bioinformatics, Saarland University, 66123 Saarbrücken, Germany.
Hans-Peter LenhofCenter for Bioinformatics, Saarland Informatics Campus, 66123 Saarbrücken, Germany.
Eckart MeeseDepartment of Human Genetics, Saarland University, 66421 Homburg/Saar, Germany.
Andreas KellerChair for Clinical Bioinformatics, Saarland University, 66123 Saarbrücken, Germany; Center for Bioinformatics, Saarland Informatics Campus, 66123 Saarbrücken, Germany. Electronic address: andreas.keller@ccb.uni-saarland.de.
Saarland University · DEGerman Center for Neurodegenerative Diseases · DEHeidelberg University · DESt. Franziskus Hospital · DEUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Blood-borne small non-coding (sncRNAs) are among the prominent candidates for blood-based diagnostic tests. Often, high-throughput approaches are applied to discover biomarker signatures. These have to be validated in larger cohorts and evaluated by adequate statistical learning approaches. Previously, we published high-throughput sequencing based microRNA (miRNA) signatures in Alzheimer's disease (AD) patients in the United States (US) and Germany. Here, we determined abundance levels of 21 known circulating miRNAs in 465 individuals encompassing AD patients and controls by RT-qPCR. We computed models to assess the relation between miRNA expression and phenotypes, gender, age, or disease severity (Mini-Mental State Examination; MMSE). Of the 21 miRNAs, expression levels of 20 miRNAs were consistently de-regulated in the US and German cohorts. 18 miRNAs were significantly correlated with neurodegeneration (Benjamini-Hochberg adjusted P < 0.05) with highest significance for miR-532-5p (Benjamini-Hochberg adjusted P = 4.8 × 10

Indexed as

Machine LearningAlzheimer DiseaseArea Under CurveBiomarkersExosomesFemaleGermanyHigh-Throughput Nucleotide SequencingHumansMaleMicroRNAsMonocytesReal-Time Polymerase Chain ReactionT-Lymphocytes, Helper-InducerUp-RegulationBiomarkersMicroRNAsAlzheimer’s diseaseBiomarkerGene regulationmiRNAsNeurodegenerationNon-coding RNAs

Identifiers

PMID31809862
PMCPMC6943763
OpenAlexW2993429139

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.