Evidence map›Paper›PMID 31808741›Full record

ArticleeLife2019

Homeostasis of branched-chain amino acids is critical for the activity of TOR signaling in

Pengfei Cao, Sang-Jin Kim, Anqi Xing, Craig A Schenck, Lu Liu, Nan Jiang, Jie Wang, Robert L Last, Federica Brandizzi

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 112 citations in OpenAlex.

  1. Article
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  9. Review
  10. Genetic suppressor ofFrontiers in plant science · 2025
    Article
  11. The amino acid permeaseHorticulture research · 2025
    Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. TORC pathway intersects with a calcium sensor kinase network to regulate potassium sensing inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Pengfei CaoMSU-DOE Plant Research Lab, Michigan State University, East Lansing, United States.ORCID 0000-0001-6998-9302
Sang-Jin KimGreat Lakes Bioenergy Research Center, Michigan State University, East Lansing, United States.
Anqi XingDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, United States.
Craig A SchenckDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, United States.ORCID 0000-0002-5711-7213
Lu LiuMSU-DOE Plant Research Lab, Michigan State University, East Lansing, United States.
Nan JiangDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, United States.
Jie WangDepartment of Plant Biology, Michigan State University, East Lansing, United States.
Robert L LastDepartment of Plant Biology, Michigan State University, East Lansing, United States.ORCID 0000-0001-6974-9587
Federica BrandizziMSU-DOE Plant Research Lab, Michigan State University, East Lansing, United States.ORCID 0000-0003-0580-8888
Michigan State University · USGreat Lakes Bioenergy Research Center · US

Funding

Unfolded protein response in the model species Arabidopsis thalianaR01GM101038 · NIGMS · MICHIGAN STATE UNIVERSITY · PI BRANDIZZI, FEDERICA · 2012 to 2019
$2.5M
NIGMS NIH HHS R01 GM101038
6 · The paper itself

Abstract

The target of rapamycin (TOR) kinase is an evolutionarily conserved hub of nutrient sensing and metabolic signaling. In plants, a functional connection of TOR activation with glucose availability was demonstrated, while it is yet unclear whether branched-chain amino acids (BCAAs) are a primary input of TOR signaling as they are in yeast and mammalian cells. Here, we report on the characterization of an Arabidopsis mutant over-accumulating BCAAs. Through chemical interventions targeting TOR and by examining mutants of BCAA biosynthesis and TOR signaling, we found that BCAA over-accumulation leads to up-regulation of TOR activity, which causes reorganization of the actin cytoskeleton and actin-associated endomembranes. Finally, we show that activation of TOR is concomitant with alteration of cell expansion, proliferation and specialized metabolism, leading to pleiotropic effects on plant growth and development. These results demonstrate that BCAAs contribute to plant TOR activation and reveal previously uncharted downstream subcellular processes of TOR signaling.

Indexed as

Signal TransductionActin CytoskeletonAmino Acids, Branched-ChainArabidopsisArabidopsis ProteinsHomeostasisIntracellular MembranesPhosphatidylinositol 3-KinasesAmino Acids, Branched-ChainArabidopsis ProteinsPhosphatidylinositol 3-KinasesTOR protein, Arabidopsisactin cytoskeletonA. thalianabranched-chain amino acidsendoplasmic reticulumplant biologyTOR Signalingvacuole

Identifiers

PMID31808741
PMCPMC6937141
OpenAlexW2993534953

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.