Evidence map›Paper›PMID 31805951›Full record

ArticleLipids in health and disease2019

Target genes associated with lipid and glucose metabolism in non-alcoholic fatty liver disease.

Ting Li, Hua Yan, Yan Geng, Haitao Shi, Hong Li, Shenhao Wang, Yatao Wang, Jingyuan Xu, Gang Zhao, Xiaolan Lu

Open access · goldAbstract read
In one paragraph

Article in Lipids in health and disease, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

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  15. Cellular Mechanisms of Liver Fibrosis.Frontiers in pharmacology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Ting LiHealth Science Center, Xi'an Jiaotong University, NO.76 Yanta West Road, Xi'an, 710061, China.
Hua YanDepartment of Geratology, Shaanxi Provincal People's Hospital, Third Affiliated Hospital of Xi'an Jiaotong University, Xi'an, 710068, China.
Yan GengDepartment of Paediatrics, The Second Affiliated Hospital of Xi'an Jiaotong University, Xi'an, 710004, China.
Haitao ShiDepartment of Gastroenterology, The Second Affiliated Hospital of Xi'an Jiaotong University, NO.157 West 5th Road, Xi'an, 710004, China.
Hong LiDepartment of Gastroenterology, The Second Affiliated Hospital of Xi'an Jiaotong University, NO.157 West 5th Road, Xi'an, 710004, China.
Shenhao WangDepartment of Gastroenterology, The Second Affiliated Hospital of Xi'an Jiaotong University, NO.157 West 5th Road, Xi'an, 710004, China.
Yatao WangHealth Science Center, Xi'an Jiaotong University, NO.76 Yanta West Road, Xi'an, 710061, China.
Jingyuan XuHealth Science Center, Xi'an Jiaotong University, NO.76 Yanta West Road, Xi'an, 710061, China.
Gang ZhaoDepartment of Gastroenterology, The Second Affiliated Hospital of Xi'an Jiaotong University, NO.157 West 5th Road, Xi'an, 710004, China.
Xiaolan LuDepartment of Gastroenterology, The Second Affiliated Hospital of Xi'an Jiaotong University, NO.157 West 5th Road, Xi'an, 710004, China. xiaolan_lu@163.com.ORCID http://orcid.org/0000-0001-5745-6373
Second Affiliated Hospital of Xi'an Jiaotong University · CNXi'an Jiaotong University · CNPudong Medical Center · CNShaanxi Provincial People's Hospital · CN

Funding

Chinese Foundation for Hepatitis Prevention and Control WBE20181025National Natural Science Foundation of China 81070328
6 · The paper itself

Abstract

backgroundInsulin resistance (IR) and lipid peroxidation are accepted as 'two-hit' hypothesis of Non-alcoholic fatty liver disease (NAFLD). However, there are few published research on identifying genes which connect lipid and glucose metabolism by gene microarray.

objectiveTo identify target genes related to lipid and glucose metabolism that might be responsible for the pathogenesis of NAFLD.

methodsA rat model of NAFLD was established by feeding male rats with high-fat diet and gene expression profiles of liver tissues were determined using Agilent DNA microarray. We then investigated differentially expressed genes (DEGs) and intersection of them by using Gene Ontology (GO) and Pathway Analyses. Target genes were verified by Real-time polymerase chain reaction (RT-PCR).

resultsCompared with control, 932 genes, including 783 up-regulated and 149 down-regulated, exhibited differences in expression. The up-regulated genes were involved in biosynthesis, cell development, cell differentiation and down-regulated genes contributed to biological metabolic process, adipokine metabolic pathway and insulin signaling pathway. We identified genes involved in insulin signaling pathway, Notch signaling pathway and lipid synthetic process to be closely related to liver fat accumulation and insulin resistance. Among them, IGFBP7, Notch1 and HMGCR were up-regulated (2.85-fold, 3.22-fold, and 2.06-fold, respectively, all P < 0.05) and ACACB was down-regulated (2.08-fold, P < 0.01). These four genes supposed to connect lipid and glucose metabolism after GO and Pathway analyses.

conclusionsThese findings provide innovative information on the whole genome expression profile due to high-fat diet feeding, and bring new insight into the regulating effects of genes on the lipid and glucose metabolism of NAFLD.

Indexed as

Acetyl-CoA CarboxylaseAnimalsCarbohydrate MetabolismDiet, High-FatDisease Models, AnimalGene Expression ProfilingGene Expression RegulationGene OntologyGlucoseHydroxymethylglutaryl CoA ReductasesInsulin-Like Growth Factor Binding ProteinsInsulin ResistanceLipid MetabolismLiverMaleMicroarray AnalysisAcacb protein, mouseAcetyl-CoA CarboxylaseGlucoseHydroxymethylglutaryl CoA Reductasesinsulin-like growth factor binding protein-related protein 1Insulin-Like Growth Factor Binding ProteinsNotch1 protein, ratReceptor, Notch1Gene microarrayGlucose metabolismLipids metabolismNAFLDTarget genes

Identifiers

PMID31805951
PMCPMC6894500
OpenAlexW2991820551

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.