Evidence map›Paper›PMID 31804739›Full record

Trial reportAmerican journal of hematology2020

Deletion 20q12 is associated with histological transformation of nodal marginal zone lymphoma to diffuse large B-cell lymphoma.

Lei Qian, Craig Soderquist, April Schrank-Hacker, Honore Strauser, Vanessa Dupoux, Chi Ngong Tang, Jennifer R Smith, Ang Sun, Sonali Majumdar, Tran Nguyen and 5 more

Open access · bronzeAbstract readCase ReportsClinical Trial
In one paragraph

Trial report in American journal of hematology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact, top 79% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 1 country.

Lei QianDepartment of Medical Genetics & Molecular Biochemistry, Lewis Katz School of Medicine, Temple University, Philadelphia, Pennsylvania.
Craig SoderquistDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York, Pennsylvania.
April Schrank-HackerDepartment of Pathology and Laboratory Medicine, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania.
Honore StrauserDepartment of Pathology and Laboratory Medicine, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania.
Vanessa DupouxDepartment of Pathology and Laboratory Medicine, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania.
Chi Ngong TangDepartment of Pathology and Laboratory Medicine, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania.
Jennifer R SmithDepartment of Pathology and Laboratory Medicine, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania.
Ang SunDepartment of Biology, Temple University, Philadelphia, Pennsylvania.
Sonali MajumdarWistar Genomics Shared Resource, The Wistar Institute, Philadelphia, Pennsylvania.
Tran NguyenWistar Genomics Shared Resource, The Wistar Institute, Philadelphia, Pennsylvania.
Sandy WiduraWistar Genomics Shared Resource, The Wistar Institute, Philadelphia, Pennsylvania.
Daniel J LandsburgDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
Stephen J SchusterDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
Richard H G BaxterDepartment of Medical Genetics & Molecular Biochemistry, Lewis Katz School of Medicine, Temple University, Philadelphia, Pennsylvania.
Agata M BoguszDepartment of Pathology and Laboratory Medicine, Hospital of the University of Pennsylvania, Philadelphia, Pennsylvania.ORCID 0000-0003-4332-3582
Hospital of the University of Pennsylvania · USTemple University · USThe Wistar Institute · USUPMC Hillman Cancer Center · USColumbia University Irving Medical Center · US

Funding

Mechanism of mosquito complement-like immunityR01GM114358 · NIGMS · YALE UNIVERSITY · PI BAXTER, RICHARD H. G. · 2015 to 2019
$1.5M
NIGMS NIH HHS 1R01GM114358NIGMS NIH HHS R01 GM114358
6 · The paper itself

Abstract

The genetic and molecular abnormalities underlying histological transformation (HT) of nodal marginal zone lymphoma (NMZL) to diffuse large B-cell lymphoma (DLBCL) are not well known. While del(20q12) is commonly deleted in myelodysplastic syndrome it has not previously been associated with DLBCL. We recently described a case of DLBCL harboring del(20q12) in a patient with a history of MZL involving lymph nodes and skin. Here we report eight matched cases of transformed MZL(tMZL): six from nodal MZL (tNMZL) and two from splenic MZL (tSMZL). We found >20% del(20q12) in 4/6 tNMZL, but not in tSMZL, nor in unmatched DLBCL, MZL with increased large cells (MZL-ILC), or MZL cases. To examine whether transformation is associated with a specific gene signature, the matched cases were analyzed for multiplexed gene expression using the Nanostring PanCancer Pathways panel. The differential gene expression signature revealed enrichment of inflammatory markers, as previously observed in MZL. Also, tMZL and de novo DLBCL were enriched for extracellular matrix proteins such as collagen and fibronectin, vascular development protein PDGFRβ, DNA repair protein RAD51, and oncogenic secrete protein Wnt11. A subset of genes is expressed differentially in del(20q12) tMZL cases vs non-del(20q12) tMZL cases. These results suggest a specific pathway is involved in the histological transformation of NMZL, which could serve as an indicator of aggressive clinical course in this otherwise indolent neoplasm.

Indexed as

Chromosome DeletionGene Expression Regulation, NeoplasticLymphoma, B-Cell, Marginal ZoneLymphoma, Large B-Cell, DiffuseNeoplasm ProteinsSkin NeoplasmsAgedAged, 80 and overChromosomes, Human, Pair 20FemaleHumansMaleMiddle AgedNeoplasm Proteins

Identifiers

PMID31804739
PMCPMC7818379
OpenAlexW2992313450

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.