Evidence map›Paper›PMID 31803160›Full record

ArticleFrontiers in microbiology2019

Land Management and Microbial Seed Load Effect on Rhizosphere and Endosphere Bacterial Community Assembly in Wheat.

Vanessa Nessner Kavamura, Rebekah J Robinson, Rifat Hayat, Ian M Clark, David Hughes, Maike Rossmann, Penny R Hirsch, Rodrigo Mendes, Tim H Mauchline

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Bacillus aryabhattai and silicon modulate soil biological activity and performance of Mimosa caesalpiniifolia under water deficit.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2026
    Article
  2. Article
  3. Article
  4. Journal of fungi (Basel, Switzerland) · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Frontiers in microbiology · 2021
    Article
  10. Article
  11. Defining the wheat microbiome: Towards microbiome-facilitated crop production.Computational and structural biotechnology journal · 2021
    Review
  12. New Insight into the Composition of Wheat Seed Microbiota.International journal of molecular sciences · 2020
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Vanessa Nessner KavamuraSustainable Agriculture Sciences, Rothamsted Research, Harpenden, United Kingdom.
Rebekah J RobinsonPlant Pathology Laboratory, RHS Garden Wisley, Woking, United Kingdom.
Rifat HayatDepartment of Soil Science and Soil and Water Conservation, Pir Mehr Ali Shah Arid Agriculture University, Rawalpindi, Pakistan.
Ian M ClarkSustainable Agriculture Sciences, Rothamsted Research, Harpenden, United Kingdom.
David HughesComputational and Analytical Sciences, Rothamsted Research, Harpenden, United Kingdom.
Maike RossmannLaboratory of Environmental Microbiology, Embrapa Meio Ambiente, Jaguariúna, Brazil.
Penny R HirschSustainable Agriculture Sciences, Rothamsted Research, Harpenden, United Kingdom.
Rodrigo MendesLaboratory of Environmental Microbiology, Embrapa Meio Ambiente, Jaguariúna, Brazil.
Tim H MauchlineSustainable Agriculture Sciences, Rothamsted Research, Harpenden, United Kingdom.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial community ecology studies have traditionally utilized culture-based methodologies, though the advent of next-generation amplicon sequencing has facilitated superior resolution analyses of complex microbial communities. Here, we used culture-dependent and -independent approaches to explore the influence of land use as well as microbial seed load on bacterial community structure of the wheat rhizosphere and root endosphere. It was found that niche was an important factor in shaping the microbiome when using both methodological approaches, and that land use was also a discriminatory factor for the culture-independent-based method. Although culture-independent methods provide a higher resolution of analysis, it was found that in the rhizosphere, particular operational taxonomic units (OTUs) in the culture-dependent fraction were absent from the culture-independent fraction, indicating that deeper sequence analysis is required for this approach to be exhaustive. We also found that the microbial seed load defined the endosphere, but not rhizosphere, community structure for plants grown in soil which was not wheat adapted. Together, these findings increase our understanding of the importance of land management and microbial seed load in shaping the root microbiome of wheat and this knowledge will facilitate the exploitation of plant-microbe interactions for the development of novel microbial inoculants.

Indexed as

embryoendospheremicrobiomerhizosphereseedwheat

Identifiers

PMID31803160
PMCPMC6873152

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.