Evidence map›Paper›PMID 31801839›Full record

ArticleJournal of clinical microbiology2020

Helicobacter pylori Infections in the Bronx, New York: Surveying Antibiotic Susceptibility and Strain Lineage by Whole-Genome Sequencing.

Rajagopalan Saranathan, Michael H Levi, Alice R Wattam, Adel Malek, Emmanuel Asare, Daniel S Behin, Debra H Pan, William R Jacobs, Wendy A Szymczak

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Article
  3. Antibiotic Resistance and Genetic Determinants ofInternational journal of molecular sciences · 2025
    Article
  4. Population structure ofJournal of clinical microbiology · 2025
    Article
  5. Article
  6. Overcoming antibiotic-resistantWorld journal of gastroenterology · 2025
    Review
  7. Analysis of antibiotic susceptibility and genomic characteristics of Helicobacter pylori by whole-genome resequencing in Northern China.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
    Article
  8. Helicobacter pylori Infection in Colombia: Phylogeny, Resistome, and Virulome.APMIS : acta pathologica, microbiologica, et immunologica Scandinavica · 2025
    Article
  9. Clinical evaluation of a real-time PCR assay for diagnosis ofInternational journal of clinical and experimental pathology · 2024
    Article
  10. Molecular tools of antibiotic resistance forFrontiers in gastroenterology (Lausanne, Switzerland) · 2024
    Review
  11. Frontiers in cellular and infection microbiology · 2024
    Article
  12. Article
  13. Global Antimicrobial Resistance Gene Study ofAntibiotics (Basel, Switzerland) · 2023
    Article
  14. Article
  15. MAT Gain of Activity Mutation inACS infectious diseases · 2023
    Article
  16. Prevalence ofInfection and drug resistance · 2023
    Article
  17. Multidrug resistance inFrontiers in microbiology · 2023
    Review
  18. Review
  19. A Survey ofAntimicrobial agents and chemotherapy · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Rajagopalan SaranathanDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, New York, USA.
Michael H LeviDepartment of Pathology, Albert Einstein College of Medicine and Montefiore Medical Center, Bronx, New York, USA.
Alice R WattamBiocomplexity Institute and Initiative, University of Virginia, Charlottesville, Virginia, USA.
Adel MalekProvincial Public Health Laboratory, Eastern Health Microbiology Services, St. John's, New Foundland and Labrador, Canada.
Emmanuel AsareDepartment of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, New York, USA.
Daniel S BehinDepartment of Medicine, Division of Gastroenterology, Albert Einstein College of Medicine and Montefiore Medical Center, Bronx, New York, USA.
Debra H PanDepartment of Pediatrics, Division of Gastroenterology and Nutrition, Albert Einstein College of Medicine and Montefiore Medical Center, Bronx, New York, USA.
William R Jacobs *Department of Microbiology and Immunology, Albert Einstein College of Medicine, Bronx, New York, USA.
Wendy A Szymczak *Department of Pathology, Albert Einstein College of Medicine and Montefiore Medical Center, Bronx, New York, USA wszymcza@montefiore.org.

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI STEVEN C. ALMO · 1985 to 2026
$111.2M
Molecular Genetic Analysis of Mycobacterium TuberculosisR37AI026170 · NIAID · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI WILLIAM Robert JACOBS · 2004 to 2026
$7.7M
MOLECULAR GENETIC ANALYSIS OF MYCOBACTERIUM TUBERCULOSISR01AI026170 · NIAID · YESHIVA UNIVERSITY · PI JACOBS, WILLIAM ROBERT · 1989 to 2022
$7.1M
NCI NIH HHS P30 CA013330NIAID NIH HHS R37 AI026170
6 · The paper itself

Abstract

The emergence of drug resistance in

Indexed as

Anti-Bacterial AgentsHelicobacter InfectionsHelicobacter pyloriClarithromycinDrug Resistance, BacterialFemaleHumansMaleMetronidazoleMicrobial Sensitivity TestsMutationNew YorkRNA, Ribosomal, 16SRNA, Ribosomal, 23SYoung AdultAnti-Bacterial AgentsClarithromycinMetronidazoleRNA, Ribosomal, 16SRNA, Ribosomal, 23Samoxicillinantimicrobial susceptibility testingclarithromycinHelicobacter pylorilevofloxacinlineagemetronidazolerifampintetracyclineswhole-genome sequencing

Identifiers

PMID31801839
PMCPMC7041580

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.