Evidence map›Paper›PMID 31801481›Full record

ArticleBMC plant biology2019

A T-DNA mutant screen that combines high-throughput phenotyping with the efficient identification of mutated genes by targeted genome sequencing.

Ulrike Frank, Susanne Kublik, Dörte Mayer, Marion Engel, Michael Schloter, Jörg Durner, Frank Gaupels

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ulrike FrankInstitute of Biochemical Plant Pathology, Helmholtz Zentrum München, Neuherberg, Germany.
Susanne KublikResearch Unit for Comparative Microbiome Analysis, Helmholtz Zentrum München, Neuherberg, Germany.
Dörte MayerInstitute of Biochemical Plant Pathology, Helmholtz Zentrum München, Neuherberg, Germany.
Marion EngelScientific Computing Research Unit, Helmholtz Zentrum München, Neuherberg, Germany.
Michael SchloterResearch Unit for Comparative Microbiome Analysis, Helmholtz Zentrum München, Neuherberg, Germany.
Jörg DurnerInstitute of Biochemical Plant Pathology, Helmholtz Zentrum München, Neuherberg, Germany.
Frank GaupelsInstitute of Biochemical Plant Pathology, Helmholtz Zentrum München, Neuherberg, Germany. frank.gaupels@gmx.de.ORCID http://orcid.org/0000-0002-6079-6800
Helmholtz Zentrum München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNitrogen dioxide (NO

resultsAltogether 14,282 lines of SALK T-DNA insertion mutants were screened. Growing 1000 pooled mutant lines per tray and simultaneous NO

conclusionsThe presented NO

Indexed as

Genome, PlantMutationArabidopsisDNA, BacterialHigh-Throughput Nucleotide SequencingPhenotypeDNA, BacterialT-DNAAdapter ligation-mediated PCRArabidopsis thalianaHigh-throughput phenotypingMutant screenNext generation sequencingTarget enrichmentT-DNA insertion

Identifiers

PMID31801481
PMCPMC6894221
OpenAlexW2993342787

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.