Evidence map›Paper›PMID 31800569›Full record

ArticlePloS one2019

Expressional artifact caused by a co-injection marker rol-6 in C. elegans.

HoYong Jin, Scott W Emmons, Byunghyuk Kim

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 84% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

HoYong JinDepartment of Life Science, Dongguk University-Seoul, Goyang, Republic of Korea.
Scott W EmmonsDepartment of Genetics and Dominick P. Purpura Department of Neuroscience, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Byunghyuk KimDepartment of Life Science, Dongguk University-Seoul, Goyang, Republic of Korea.ORCID 0000-0002-2220-4173
Dongguk University · KRAlbert Einstein College of Medicine · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Neural Cell Adhesion Genes in Synaptic SpecificityR01MH112689 · NIMH · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI EMMONS, SCOTT W · 2017 to 2021
$2.1M
NIH HHS P40 OD010440NIMH NIH HHS R01 MH112689
6 · The paper itself

Abstract

In transgenic research, selection markers have greatly facilitated the generation of transgenic animals. A prerequisite for a suitable selection marker to be used along with a test gene of interest is that the marker should not affect the phenotype of interest in transformed animals. One of the most common selection markers used in C. elegans transgenic approaches is the rol-6 co-injection marker, which induces a behavioral roller phenotype due to a cuticle defect but is not known to have other side effects. However, we found that the rol-6 co-injection marker can cause expression of GFP in the test sequence in a male-specific interneuron called CP09. We found that the rol-6 gene sequence included in the marker plasmid is responsible for this unwanted expression. Accordingly, the use of the rol-6 co-injection marker is not recommended when researchers intend to examine precise expression or perform functional studies especially targeting male C. elegans neurons. The rol-6 sequence region we identified can be used to drive a specific expression in CP09 neuron for future research.

Indexed as

AnimalsAnimals, Genetically ModifiedArtifactsBiomarkersCaenorhabditis elegansCaenorhabditis elegans ProteinsCollagenGene Expression RegulationGreen Fluorescent ProteinsPhenotypePlasmidsBiomarkersCaenorhabditis elegans ProteinsCollagenGreen Fluorescent Proteinsrol-6 protein, C elegans

Identifiers

PMID31800569
PMCPMC6892501
OpenAlexW2992250344

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.