Evidence map›Paper›PMID 31799430›Full record

ArticleCommunications biology2019

Genetic variation associated with infection and the environment in the accidental pathogen

Claire Chewapreecha, Alison E Mather, Simon R Harris, Martin Hunt, Matthew T G Holden, Chutima Chaichana, Vanaporn Wuthiekanun, Gordon Dougan, Nicholas P J Day, Direk Limmathurotsakul and 2 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
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  7. Burkholderia pseudomallei and melioidosis.Nature reviews. Microbiology · 2024
    Review
  8. Review
  9. Genetic diversity, determinants, and dissemination ofbioRxiv : the preprint server for biology · 2023
    Article
  10. Article
  11. Phenotypic and genetic alterations ofFrontiers in microbiology · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Article
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  17. Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 3 countries.

Claire Chewapreecha1Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, 10400 Thailand.ORCID 0000-0002-1313-4011
Alison E Mather5Quadram Institute Bioscience, Norwich, NR4 7UQ UK.
Simon R Harris3Wellcome Sanger Institute, Hinxton, CB10 1SA UK.
Martin Hunt3Wellcome Sanger Institute, Hinxton, CB10 1SA UK.
Matthew T G Holden7School of Medicine, University of St Andrews, St. Andrews, KY16 9TF UK.ORCID 0000-0002-4958-2166
Chutima Chaichana8Department of Mathematics, Faculty of Science, King Mongkut's University of Technology Thonburi, Bangkok, 10140 Thailand.
Vanaporn Wuthiekanun1Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, 10400 Thailand.
Gordon Dougan4Department of Medicine, University of Cambridge, Cambridge, CB2 0QQ UK.
Nicholas P J Day1Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, 10400 Thailand.
Direk Limmathurotsakul1Mahidol-Oxford Tropical Medicine Research Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, 10400 Thailand.
Julian Parkhill *10Department of Veterinary Medicine, University of Cambridge, Cambridge, CB3 0ES UK.ORCID 0000-0002-7069-5958
Sharon J Peacock *4Department of Medicine, University of Cambridge, Cambridge, CB2 0QQ UK.ORCID 0000-0002-1718-2782
University of Cambridge · GBMahidol University · THWellcome Sanger Institute · GBAngkor Hospital for Children · KHKing Mongkut's University of Technology Thonburi · THUniversity of East Anglia · GBUniversity of St Andrews · GB

Funding

Biotechnology and Biological Sciences Research Council BB/R012504/1Biotechnology and Biological Sciences Research Council BBS/E/F/000PR10348Biotechnology and Biological Sciences Research Council BBS/E/F/000PR10351Department of Health HICF-T5-342Wellcome TrustWellcome Trust 089275/Z/09/ZWellcome Trust 098051Wellcome Trust 106698Wellcome Trust 216457/Z/19/ZWellcome Trust WT098600
6 · The paper itself

Abstract

The environmental bacterium

Indexed as

EnvironmentEnvironmental MicrobiologyGene-Environment InteractionGenetic VariationBurkholderia pseudomalleiEvolution, MolecularGeographyHumansMelioidosisModels, BiologicalPhylogenyPhylogeographyThailandBacterial geneticsEvolutionary geneticsGenome-wide association studies

Identifiers

PMID31799430
PMCPMC6874650
OpenAlexW2991527014

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.