Evidence map›Paper›PMID 31799386›Full record

ArticleScience advances2019

Rational discovery of antimetastatic agents targeting the intrinsically disordered region of MBD2.

Min Young Kim, Insung Na, Ji Sook Kim, Seung Han Son, Sungwoo Choi, Seol Eui Lee, Ji-Hun Kim, Kiseok Jang, Gil Alterovitz, Yu Chen and 4 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Epigenetics-targeted drugs: current paradigms and future challenges.Signal transduction and targeted therapy · 2024
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Intrinsically Disordered Proteins: An Overview.International journal of molecular sciences · 2022
    Review
  9. Article
  10. Article
  11. Inhibitors of DNA Methylation.Advances in experimental medicine and biology · 2022
    Review
  12. Article
  13. Review
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Min Young KimDepartment of Life Science and Research Institute for Natural Sciences, Hanyang University, Seoul 04763, Korea.ORCID 0000-0002-7001-3670
Insung NaDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL 33612, USA.ORCID 0000-0003-4507-5789
Ji Sook KimDepartment of Life Science and Research Institute for Natural Sciences, Hanyang University, Seoul 04763, Korea.
Seung Han SonDepartment of Life Science and Research Institute for Natural Sciences, Hanyang University, Seoul 04763, Korea.
Sungwoo ChoiDepartment of Life Science and Research Institute for Natural Sciences, Hanyang University, Seoul 04763, Korea.
Seol Eui LeeDepartment of Life Science and Research Institute for Natural Sciences, Hanyang University, Seoul 04763, Korea.
Ji-Hun KimCollege of Pharmacy, Chungbuk National University, Cheongju, Chungbuk 28160, Korea.ORCID 0000-0002-6732-9498
Kiseok JangDepartment of Pathology, Hanyang University College of Medicine, Seoul 04763, Korea.
Gil AlterovitzBoston Children's Hospital/Harvard Medical School, Boston, MA 02115, USA.
Yu ChenDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL 33612, USA.
Arjan van der VaartDepartment of Chemistry, University of South Florida, Tampa, FL 33620, USA.ORCID 0000-0002-8950-1850
Hyung-Sik WonDepartment of Biotechnology, Konkuk University, Chungju, Chungbuk 27478, Korea.ORCID 0000-0003-1884-5354
Vladimir N UverskyDepartment of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, FL 33612, USA.ORCID 0000-0002-4037-5857
Chul Geun KimDepartment of Life Science and Research Institute for Natural Sciences, Hanyang University, Seoul 04763, Korea.ORCID 0000-0002-5848-3338
Hanyang University · KRUniversity of South Florida · USChungbuk National University · KRBoston Children's Hospital · USKonkuk University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although intrinsically disordered protein regions (IDPRs) are commonly engaged in promiscuous protein-protein interactions (PPIs), using them as drug targets is challenging due to their extreme structural flexibility. We report a rational discovery of inhibitors targeting an IDPR of MBD2 that undergoes disorder-to-order transition upon PPI and is critical for the regulation of the Mi-2/NuRD chromatin remodeling complex (CRC). Computational biology was essential for identifying target site, searching for promising leads, and assessing their binding feasibility and off-target probability. Molecular action of selected leads inhibiting the targeted PPI of MBD2 was validated in vitro and in cell, followed by confirming their inhibitory effects on the epithelial-mesenchymal transition of various cancer cells. Identified lead compounds appeared to potently inhibit cancer metastasis in a murine xenograft tumor model. These results constitute a pioneering example of rationally discovered IDPR-targeting agents and suggest Mi-2/NuRD CRC and/or MBD2 as a promising target for treating cancer metastasis.

Indexed as

AnimalsComputational BiologyDNA-Binding ProteinsDrug DiscoveryEpithelial-Mesenchymal TransitionHumansIntrinsically Disordered ProteinsMi-2 Nucleosome Remodeling and Deacetylase ComplexMiceModels, MolecularNeoplasm MetastasisNeoplasmsProtein DomainsXenograft Model Antitumor AssaysCHD4 protein, humanDNA-Binding ProteinsIntrinsically Disordered ProteinsMBD2 protein, humanMi-2 Nucleosome Remodeling and Deacetylase Complex

Identifiers

PMID31799386
PMCPMC6867884
OpenAlexW2990410957

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.