Evidence map›Paper›PMID 31799022›Full record

ArticleKDD : proceedings. International Conference on Knowledge Discovery & Data Mining2019

Naranjo Question Answering using End-to-End Multi-task Learning Model.

Bhanu Pratap Singh Rawat, Fei Li, Hong Yu

Abstract read
In one paragraph

Article in KDD : proceedings. International Conference on Knowledge Discovery & Data Mining, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. ScAN: Suicide Attempt and Ideation Events Dataset.Proceedings of the conference. Association for Computational Linguistics. North American Chapter. Meeting · 2022
    Article
  2. Review
  3. BENTO: A Visual Platform for Building Clinical NLP Pipelines Based on CodaLab.Proceedings of the conference. Association for Computational Linguistics. Meeting · 2020
    Article
  4. Neural Multi-Task Learning for Adverse Drug Reaction Extraction.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Bhanu Pratap Singh RawatUMass Amherst, Amherst, USA.
Fei LiUMass Lowell, Lowell, USA.
Hong YuUMass Lowell, Lowell, USA.

Funding

EHR Anticoagulants PharmacovigilanceR01HL125089 · NHLBI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI YU, HONG · 2015 to 2019
$4.9M
NHLBI NIH HHS R01 HL125089
6 · The paper itself

Abstract

In the clinical domain, it is important to understand whether an adverse drug reaction (ADR) is caused by a particular medication. Clinical judgement studies help judge the causal relation between a medication and its ADRs. In this study, we present the first attempt to automatically infer the causality between a drug and an ADR from electronic health records (EHRs) by answering the Naranjo questionnaire, the validated clinical question answering set used by domain experts for ADR causality assessment. Using physicians' annotation as the gold standard, our proposed joint model, which uses multi-task learning to predict the answers of a subset of the Naranjo questionnaire, significantly outperforms the baseline pipeline model with a good margin, achieving a macro-weighted f-score between 0.3652 - 0.5271 and micro-weighted f-score between 0.9523 - 0.9918.

Indexed as

Attention based networkLSTMMulti-task learningNaranjo questionnaireQuestion answeringRNN

Identifiers

PMID31799022
PMCPMC6887102

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.