Evidence map›Paper›PMID 31798840›Full record

ArticleAntimicrobial resistance and infection control2019

An exploration of the gut and environmental resistome in a community in northern Vietnam in relation to antibiotic use.

Vu Thi Ngoc Bich, Le Viet Thanh, Pham Duy Thai, Tran Thi Van Phuong, Melissa Oomen, Christel Driessen, Erik Beuken, Tran Huy Hoang, H Rogier van Doorn, John Penders and 1 more

Open access · goldAbstract read
In one paragraph

Article in Antimicrobial resistance and infection control, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.3field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Resistome in the indoor dust samples from workplaces and households: a pilot study.Frontiers in cellular and infection microbiology · 2024
    Article
  6. Article
  7. Mobile Colistin Resistance (Antibiotics (Basel, Switzerland) · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Genomic epidemiological analysis ofFrontiers in veterinary science · 2022
    Article
  17. Article
  18. A review of the resistome within the digestive tract of livestock.Journal of animal science and biotechnology · 2021
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Vu Thi Ngoc BichOxford University Clinical Research Unit and Welcome Trust Major Asia Programme, Oxford, Vietnam.
Le Viet ThanhOxford University Clinical Research Unit and Welcome Trust Major Asia Programme, Oxford, Vietnam.
Pham Duy Thai4National Institute of Hygiene and Epidemiology, Ha Noi, Vietnam.
Tran Thi Van Phuong4National Institute of Hygiene and Epidemiology, Ha Noi, Vietnam.
Melissa Oomen5Department of Medical Microbiology, School for Nutrition and Translational Research in Metabolism (NUTRIM) and Care and Public Health Research Institute (Caphri), Maastricht University Medical Center, Maastricht, the Netherlands.
Christel Driessen5Department of Medical Microbiology, School for Nutrition and Translational Research in Metabolism (NUTRIM) and Care and Public Health Research Institute (Caphri), Maastricht University Medical Center, Maastricht, the Netherlands.
Erik Beuken5Department of Medical Microbiology, School for Nutrition and Translational Research in Metabolism (NUTRIM) and Care and Public Health Research Institute (Caphri), Maastricht University Medical Center, Maastricht, the Netherlands.
Tran Huy Hoang4National Institute of Hygiene and Epidemiology, Ha Noi, Vietnam.
H Rogier van DoornOxford University Clinical Research Unit and Welcome Trust Major Asia Programme, Oxford, Vietnam.
John Penders5Department of Medical Microbiology, School for Nutrition and Translational Research in Metabolism (NUTRIM) and Care and Public Health Research Institute (Caphri), Maastricht University Medical Center, Maastricht, the Netherlands.
Heiman F L Wertheim2Department of Medical Microbiology and Radboudumc Center for Infectious Diseases, Radboud University Medical Center, Nijmegen, the Netherlands.
Maastricht University · NLNational Institute Of Hygiene And Epidemiology · VNOxford University Clinical Research Unit · VNUniversity of Oxford · GB

Funding

Wellcome Trust
6 · The paper itself

Abstract

Background: Antibiotic resistance is a major global public health threat. Antibiotic use can directly impact the antibiotic resistant genes (ARGs) profile of the human intestinal microbiome and consequently the environment through shedding. Methods: We determined the resistome of human feces, animal stools, human food and environmental (rain, well, and irrigative water) samples ( Results: Nearly 40 % (39.5%, 120/304) of samples contained ESBL genes (most frequent were Conclusions: Our study indicated that ARGs were abundant in human and animal stools in a rural Vietnamese community, including ARGs targeting last resort antibiotics. The resistomes of animal and human stools were similar as opposed to the resistomes from water and food sources. No association between antibiotic use and ARG profiles was found in a setting of high background rates of AMR.

Indexed as

Genes, BacterialAdolescentAdultAnimalsAnti-Bacterial AgentsBacteriaChildChild, PreschoolDrug Resistance, Multiple, BacterialFecesFemaleGastrointestinal MicrobiomeHumansInfantInfant, NewbornLongitudinal StudiesAnti-Bacterial AgentsAntibiotic useEnvironmental resistomeMcr-1Mcr-3ResistomeVietnam

Identifiers

PMID31798840
PMCPMC6883630
OpenAlexW2990341974

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.