Evidence map›Paper›PMID 31797989›Full record

ArticleScientific reports2019

Identification of QTL for Target Leaf Spot resistance in Sorghum bicolor and investigation of relationships between disease resistance and variation in the MAMP response.

Jennifer Kimball, Yaya Cui, Dongqin Chen, Pat Brown, William L Rooney, Gary Stacey, Peter J Balint-Kurti

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

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  8. Variation in Gene Expression between TwoPlants (Basel, Switzerland) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Jennifer KimballDepartment of Agronomy and Plant Genetics, University of Minnesota, St. Paul, MN, 55108, USA.
Yaya CuiDivisions of Plant Science and Biochemistry, C. S. Bond Life Science Center, University of Missouri, Columbia, MO, 65211, USA.
Dongqin ChenDivisions of Plant Science and Biochemistry, C. S. Bond Life Science Center, University of Missouri, Columbia, MO, 65211, USA.
Pat BrownDepartment of Plant Sciences, University of California Davis, Davis, CA, 95616, USA.
William L RooneyDepartment of Soil and Crop Sciences, Texas A&M University, College Station, TX, 77843, USA.
Gary StaceyDivisions of Plant Science and Biochemistry, C. S. Bond Life Science Center, University of Missouri, Columbia, MO, 65211, USA.ORCID http://orcid.org/0000-0001-5914-2247
Peter J Balint-KurtiDept of Entomology and Plant Pathology, NC State University, Raleigh, NC, 27695, USA. Peter.Balint-Kurti@ARS.USDA.GOV.ORCID http://orcid.org/0000-0002-3916-194X
University of Missouri · USAgricultural Research Service · USTexas A&M University · USUniversity of California, Davis · USUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Target leaf spot (TLS) of sorghum, a foliar disease caused by the necrotrophic fungus Bipolaris cookei (also known as Bipolaris sorghicola), can affect grain yield in sorghum by causing premature drying of leaves and defoliation. Two sorghum recombinant inbred line (RIL) populations, BTx623/BTx642 and BTx623/SC155-14E, were assessed for TLS resistance in replicated trials. Using least square mean trait data, four TLS resistance QTL were identified, two in each population. Of these, three were previously unidentified while a major QTL on chromosome 5 in the BTx623/BTx642 RIL population corresponded to the previously identified TLS resistance gene ds1. A set of sorghum lines were assessed for production of reactive oxygen species induced by treatment with the microbe-associated molecular pattern (MAMP) flg22 (a derivative of flagellin). Flg22-induced ROS production varied between lines in a consistent fashion. One QTL associated with variation in the flg22 response was detected in the RIL populations. No evidence was found to link variation in the MAMP response to variation in TLS resistance.

Indexed as

Plant DiseasesQuantitative Trait LociSorghumAscomycotaDisease ResistanceEdible GrainHost-Pathogen InteractionsPathogen-Associated Molecular Pattern MoleculesPathogen-Associated Molecular Pattern Molecules

Identifiers

PMID31797989
PMCPMC6893015
OpenAlexW2994064559

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.