Evidence map›Paper›PMID 31797813›Full record

ArticleActa crystallographica. Section F, Structural biology communications2019

An extracellular domain of the EsaA membrane component of the type VIIb secretion system: expression, purification and crystallization.

Nicole Mietrach, Andreas Schlosser, Sebastian Geibel

Abstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Nicole MietrachInstitute for Molecular Infection Biology, Julius-Maximilians-University Würzburg, Josef Schneider Strasse 2, 97080 Würzburg, Germany.
Andreas SchlosserRudolf Virchow Center for Experimental Biomedicine, Julius-Maximilians-University Würzburg, Josef Schneider Strasse 2, 97080 Würzburg, Germany.
Sebastian GeibelInstitute for Molecular Infection Biology, Julius-Maximilians-University Würzburg, Josef Schneider Strasse 2, 97080 Würzburg, Germany.

Funding

Elitenetzwerk Bayern N-BM-2013-246
6 · The paper itself

Abstract

The membrane protein EsaA is a conserved component of the type VIIb secretion system. Limited proteolysis of purified EsaA from Staphylococcus aureus USA300 identified a stable 48 kDa fragment, which was mapped by fingerprint mass spectrometry to an uncharacterized extracellular segment of EsaA. Analysis by circular dichroism spectroscopy showed that this fragment folds into a single stable domain made of mostly α-helices with a melting point of 34.5°C. Size-exclusion chromatography combined with multi-angle light scattering indicated the formation of a dimer of the purified extracellular domain. Octahedral crystals were grown in 0.2 M ammonium citrate tribasic pH 7.0, 16% PEG 3350 using the hanging-drop vapor-diffusion method. Diffraction data were analyzed to 4.0 Å resolution, showing that the crystals belonged to the enantiomorphic tetragonal space groups P4

Indexed as

Amino Acid SequenceBacterial ProteinsBase SequenceCloning, MolecularCrystallizationCrystallography, X-RayMembrane ProteinsProtein ConformationSequence HomologyStaphylococcus aureusType VII Secretion SystemsBacterial ProteinsMembrane ProteinsType VII Secretion SystemsEsaAESAT-6-like secretion systemESSextracellular domainStaphylococcus aureus USA300type VII secretion system

Identifiers

PMID31797813
PMCPMC6891578

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.