Evidence map›Paper›PMID 31796951›Full record

ArticleThe Journal of infectious diseases2020

Human Immunodeficiency Virus (HIV)-Infected CCR6+ Rectal CD4+ T Cells and HIV Persistence On Antiretroviral Therapy.

Jenny L Anderson, Gabriela Khoury, Rémi Fromentin, Ajantha Solomon, Nicolas Chomont, Elizabeth Sinclair, Jeffrey M Milush, Wendy Hartogensis, Peter Bacchetti, Michael Roche and 10 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 50 citations in OpenAlex.

  1. The immunophenotype and proviral landscape of HIV-infected CD4 T cells during antiretroviral therapy.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. HCV-specific CD4EBioMedicine · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Altered memory CCR6EBioMedicine · 2024
    Article
  9. Article
  10. Metformin Enhances Antibody-Mediated Recognition of HIV-Infected CD4bioRxiv : the preprint server for biology · 2024
    Article
  11. STK11 mutation affects tumor proliferation by impacting CD4Central-European journal of immunology · 2024
    Article
  12. Effect of high dose vitamin DJournal of virus eradication · 2023
    Article
  13. Review
  14. Article
  15. Article
  16. The role of latency reversal in HIV cure strategies.Journal of medical primatology · 2022
    Review
  17. Observational
  18. Peripheral blood CD4Communications biology · 2022
    Article
  19. Flow Cytometry Sorting of Memory CCR6Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 3 countries.

Jenny L AndersonThe Peter Doherty Institute for Infection and Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, Victoria, Australia.
Gabriela KhouryThe Peter Doherty Institute for Infection and Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, Victoria, Australia.
Rémi FromentinCentre de Recherche du CHUM and Department of Microbiology, Infectiology and Immunology, Université de Montréal, Montreal, Quebec, Canada.
Ajantha SolomonThe Peter Doherty Institute for Infection and Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, Victoria, Australia.
Nicolas ChomontCentre de Recherche du CHUM and Department of Microbiology, Infectiology and Immunology, Université de Montréal, Montreal, Quebec, Canada.
Elizabeth SinclairDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Jeffrey M MilushDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Wendy HartogensisDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Peter BacchettiDepartment of Epidemiology and Biostatistics, University of California, San Francisco, California, USA.
Michael RocheThe Peter Doherty Institute for Infection and Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, Victoria, Australia.
Carolin TumpachThe Peter Doherty Institute for Infection and Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, Victoria, Australia.
Matthew GartnerSchool of Health and Biomedical Sciences, RMIT University, Melbourne, Victoria, Australia.
Matthew C PitmanThe Peter Doherty Institute for Infection and Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, Victoria, Australia.
Christine Lorrie EplingDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Rebecca HohDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Frederick M HechtDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Ma SomsoukDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Paul U CameronThe Peter Doherty Institute for Infection and Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, Victoria, Australia.
Steven G DeeksDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Sharon R LewinThe Peter Doherty Institute for Infection and Immunity, The University of Melbourne and Royal Melbourne Hospital, Melbourne, Victoria, Australia.
University of California, San Francisco · USThe Royal Melbourne Hospital · AUCentre Hospitalier de l’Université de Montréal · CARMIT University · AU

Funding

Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS · 1988 to 2026
$93.6M
Viral reservoirs and sanctuaries in HAART - treated patients: role and mechanismsU19AI096109 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SCHACKER, TIMOTHY W · 2011 to 2015
$29.5M
Delaney AIDS Research Enterprise to Cure HIVUM1AI126611 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DEEKS, STEVEN GRANT, PICKER, LOUIS J. · 2016 to 2020
$27.9M
NIAID NIH HHS P30 AI027763NIAID NIH HHS U19 AI096109NIAID NIH HHS UM1 AI126611
6 · The paper itself

Abstract

backgroundIdentifying where human immunodeficiency virus (HIV) persists in people living with HIV and receiving antiretroviral therapy is critical to develop cure strategies. We assessed the relationship of HIV persistence to expression of chemokine receptors and their chemokines in blood (n = 48) and in rectal (n = 20) and lymph node (LN; n = 8) tissue collected from people living with HIV who were receiving suppressive antiretroviral therapy.

methodsCell-associated integrated HIV DNA, unspliced HIV RNA, and chemokine messenger RNA were quantified by quantitative polymerase chain reaction. Chemokine receptor expression on CD4+ T cells was determined using flow cytometry.

resultsIntegrated HIV DNA levels in CD4+ T cells, CCR6+CXCR3+ memory CD4+ T-cell frequency, and CCL20 expression (ligand for CCR6) were highest in rectal tissue, where HIV-infected CCR6+ T cells accounted for nearly all infected cells (median, 89.7%). Conversely in LN tissue, CCR6+ T cells were infrequent, and there was a statistically significant association of cell-associated HIV DNA and RNA with CCL19, CCL21, and CXCL13 chemokines.

conclusionsHIV-infected CCR6+ CD4+ T cells accounted for the majority of infected cells in rectal tissue. The different relationships between HIV persistence and T-cell subsets and chemokines in rectal and LN tissue suggest that different tissue-specific strategies may be required to eliminate HIV persistence and that assessment of biomarkers for HIV persistence may not be generalizable between blood and other tissues.

Indexed as

Anti-Retroviral AgentsCD4-Positive T-LymphocytesChemokinesDNA, ViralFemaleHIVHIV InfectionsHumansLymph NodesMaleMiddle AgedPolymerase Chain ReactionReceptors, CCR6RectumRNA, ViralAnti-Retroviral AgentsCCR6 protein, humanChemokinesDNA, ViralReceptors, CCR6RNA, ViralCCR6chemokine receptorchemokinesCXCR3HIV reservoirlatencylymph nodepersistencerectal tissue

Identifiers

PMID31796951
PMCPMC7026892
OpenAlexW2992793004

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.