Evidence map›Paper›PMID 31796627›Full record

ArticleThe Journal of biological chemistry2020

Structural basis for shieldin complex subunit 3-mediated recruitment of the checkpoint protein REV7 during DNA double-strand break repair.

Yaxin Dai, Fan Zhang, Longge Wang, Shan Shan, Zihua Gong, Zheng Zhou

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. eLife · 2024
    Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. REV7 directs DNA repair pathway choice.Trends in cell biology · 2021
    Review
  10. Article
  11. REV7: Jack of many trades.Trends in cell biology · 2021
    Review
  12. Article
  13. Molecular mechanisms of assembly and TRIP13-mediated remodeling of the human Shieldin complex.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  14. Review
  15. p31Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  16. Disassembly of the Shieldin Complex by TRIP13.Cell cycle (Georgetown, Tex.) · 2020
    Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yaxin DaiNational Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China; Institute of Biophysics, University of Chinese Academy of Sciences, Beijing 100049, China.
Fan ZhangDepartment of Cancer Biology, Cleveland Clinic Lerner Research Institute, Cleveland, Ohio 44195.
Longge WangNational Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China; Institute of Biophysics, University of Chinese Academy of Sciences, Beijing 100049, China.
Shan ShanNational Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China.
Zihua GongDepartment of Cancer Biology, Cleveland Clinic Lerner Research Institute, Cleveland, Ohio 44195. Electronic address: gongz@ccf.org.
Zheng ZhouNational Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China; Institute of Biophysics, University of Chinese Academy of Sciences, Beijing 100049, China. Electronic address: zhouzh@ibp.ac.cn.

Funding

The role of NUDT16 in DNA damage response and tumorigenesisR01CA222195 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI Zihua Gong · 2019 to 2026
$3.8M
NCI NIH HHS R01 CA222195
6 · The paper itself

Abstract

Shieldin complex subunit 3 (SHLD3) is the apical subunit of a recently-identified shieldin complex and plays a critical role in DNA double-strand break repair. To fulfill its function in DNA repair, SHLD3 interacts with the mitotic spindle assembly checkpoint protein REV7 homolog (REV7), but the details of this interaction remain obscure. Here, we present the crystal structures of REV7 in complex with SHLD3's REV7-binding domain (RBD) at 2.2-2.3 Å resolutions. The structures revealed that the ladle-shaped RBD in SHLD3 uses its N-terminal loop and C-terminal α-helix (αC-helix) in its interaction with REV7. The N-terminal loop exhibited a structure similar to those previously identified in other REV7-binding proteins, and the less-conserved αC-helix region adopted a distinct mode for binding REV7.

Indexed as

Binding SitesCell Cycle ProteinsConserved SequenceDNA-Binding ProteinsHumansMad2 ProteinsMolecular Docking SimulationProtein BindingProtein Conformation, alpha-HelicalRecombinational DNA RepairCell Cycle ProteinsDNA-Binding ProteinsMAD2L2 protein, humanMad2 ProteinsSHLD3 protein, humancrystal structureDNA repairisothermal titration calorimetry (ITC)mitotic arrest deficient 2 like 2 (MAD2L2)nonhomologous end-joining repairprotein–protein interactionREV7shieldin complex subunit 3 (SHLD3)structural biologysurface plasmon resonance (SPR)

Identifiers

PMID31796627
PMCPMC6952594

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.