Evidence map›Paper›PMID 31795919›Full record

ArticleOpen biology2019

Loss of TOP3B leads to increased R-loop formation and genome instability.

Tao Zhang, Mathew Wallis, Vida Petrovic, Jackie Challis, Paul Kalitsis, Damien F Hudson

Open access · goldAbstract read
In one paragraph

Article in Open biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 89 citations in OpenAlex.

  1. Article
  2. The Roles of Topoisomerases in Transcriptional Regulation.International journal of molecular sciences · 2026
    Review
  3. Differential roles of type I topoisomerases in regulating HPV pathogenesis.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Current aging science · 2026
    Article
  5. Article
  6. Review
  7. Article
  8. Furanoheliangolides fromJournal of natural products · 2025
    Article
  9. Article
  10. Review
  11. Topoisomerase IIIβ protects from tumorigenesis and immune dysregulation.bioRxiv : the preprint server for biology · 2025
    Article
  12. Article
  13. AAV-mediated genome editing is influenced by the formation of R-loops.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  14. Article
  15. AAV-mediated genome editing is influenced by the formation of R-loops.bioRxiv : the preprint server for biology · 2024
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Identification and characterization of topoisomerase III beta poisons.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Tao ZhangMurdoch Children's Research Institute, Royal Children's Hospital, Melbourne, Victoria 3052, Australia.
Mathew WallisTasmanian Clinical Genetics Services, Royal Hobart Hospital, Hobart, Tasmania 7001, Australia.
Vida PetrovicCytogenetics Department, Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Royal Children's Hospital, Parkville, Victoria 3052, Australia.
Jackie ChallisCytogenetics Department, Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Royal Children's Hospital, Parkville, Victoria 3052, Australia.
Paul KalitsisMurdoch Children's Research Institute, Royal Children's Hospital, Melbourne, Victoria 3052, Australia.
Damien F HudsonMurdoch Children's Research Institute, Royal Children's Hospital, Melbourne, Victoria 3052, Australia.
Royal Children's Hospital · AUUniversity of Tasmania · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Topoisomerase III beta (TOP3B) is one of the least understood members of the topoisomerase family of proteins and remains enigmatic. Our recent data shed light on the function and relevance of TOP3B to disease. A homozygous deletion for the TOP3B gene was identified in a patient with bilateral renal cancer. Analyses in both patient and modelled human cells show the disruption of TOP3B causes genome instability with a rise in DNA damage and chromosome bridging (mis-segregation). The primary molecular defect underlying this pathology is a significant increase in R-loop formation. Our data show that TOP3B is necessary to prevent the accumulation of excessive R-loops and identify TOP3B as a putative cancer gene, and support recent data showing that R-loops are involved in cancer aetiology.

Indexed as

Genomic InstabilityR-Loop StructuresCell Line, TumorDNA DamageDNA Topoisomerases, Type IHomozygoteHumansSequence DeletionDNA Topoisomerases, Type ITOP3B protein, humangenomic instabilityR-loopTOP3Btopoisomerase

Identifiers

PMID31795919
PMCPMC6936252
OpenAlexW2992053073

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.