Evidence map›Paper›PMID 31792713›Full record

ArticlePlant molecular biology2020

Differential expression of major genes involved in the biosynthesis of aliphatic glucosinolates in intergeneric Baemoochae (Brassicaceae) and its parents during development.

Adji Baskoro Dwi Nugroho, Narae Han, Aditya Nurmalita Pervitasari, Dong-Hwan Kim, Jongkee Kim

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In one paragraph

Article in Plant molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Large insertion in radishFrontiers in plant science · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Induction of Glucoraphasatin Biosynthesis Genes by MYB29 in Radish (International journal of molecular sciences · 2020
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Adji Baskoro Dwi NugrohoDepartment of Plant Science and Technology, Chung-Ang University, Anseong, 17546, Republic of Korea.
Narae HanDepartment of Plant Science and Technology, Chung-Ang University, Anseong, 17546, Republic of Korea.
Aditya Nurmalita PervitasariDepartment of Plant Science and Technology, Chung-Ang University, Anseong, 17546, Republic of Korea.
Dong-Hwan KimDepartment of Plant Science and Technology, Chung-Ang University, Anseong, 17546, Republic of Korea. dhkim92@cau.ac.kr.ORCID http://orcid.org/0000-0003-3348-4948
Jongkee KimDepartment of Plant Science and Technology, Chung-Ang University, Anseong, 17546, Republic of Korea. jkkim@cau.ac.kr.
Chung-Ang University · KR

Funding

Chung-Ang University 201801238-001-00Korea Institute of Planning and Evaluation for Technology in Food, Agriculture, Forestry and Fisheries 112011-5
6 · The paper itself

Abstract

key messageThus study found the temporal and spatial relationship between production of aliphatic glucosinolate compounds and the expression profile of glucosinolate-related genes during growth and development in radish, Chinese cabbage, and their intergeneric hybrid baemoochae plants. Glucosinolates (GSLs) are one of major bioactive compounds in Brassicaceae plants. GSLs play a role in defense against microbes as well as chemo-preventative activity against cancer, which draw attentions from plant scientists. We investigated the temporal relationship between production of aliphatic Glucosinolate (GSLs) compounds and the expression profile of GSL related genes during growth and development in radish, Chinese cabbage, and their intergeneric hybrid, baemoochae. Over the complete life cycle, Glucoraphasatin (GRH) and glucoraphanin (GRE) predominated in radish, whereas gluconapin (GNP), glucobrassicanapin (GBN), and glucoraphanin (GRA) abounded in Chinese cabbage. Baemoochae contained intermediate levels of all GSLs studied, indicating inheritance from both radish and Chinese cabbage. Expression patterns of BCAT4, CYP79F1, CYP83A1, UGT74B1, GRS1, FMOgs-ox1, and AOP2 genes showed a correlation to their corresponding encoded proteins in radish, Chinese cabbage, and baemoochae. Interestingly, there is a sharp change in gene expression pattern involved in side chain modification, particularly GRS1, FMOgs-ox1, and AOP2, among these plants during the vegetative and reproductive stage. For instance, the GRS1 was strongly expressed during leaf development, while both of FMOgs-ox1 and AOP2 was manifested high in floral tissues. Furthermore, expression of GRS1 gene which is responsible for GRH production was predominantly expressed in leaf tissues of radish and baemoochae, whereas it was only slightly detected in Chinese cabbage root tissue, explaining why radish has an abundance of GRH compared to other Brassica plants. Altogether, our comprehensive and comparative data proved that aliphatic GSLs biosynthesis is dynamically and precisely regulated in a tissue- and development-dependent manner in Brassicaceae family members.

Indexed as

Gene Expression Regulation, PlantPlant DevelopmentAmino Acid SequenceArabidopsisBrassicaGenes, PlantGlucosinolatesImidoestersLife Cycle StagesMitochondrial ProteinsOximesPhylogenyPlant LeavesPlant ProteinsPlants, Genetically ModifiedSulfoxides3-butenyl glucosinolateglucoraphaninGlucosinolatesImidoestersMitochondrial ProteinsOximesPlant ProteinsSulfoxidesAOP2BaemoochaeChinese cabbageFMOgs-ox1GlucosinolatesGRS1Radish

Identifiers

PMID31792713
OpenAlexW2991575865

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.