Evidence map›Paper›PMID 31792362›Full record

ArticleScientific reports2019

LIN28B affects gene expression at the hypothalamic-pituitary axis and serum testosterone levels.

Jaakko T Leinonen, Yu-Chia Chen, Jana Pennonen, Leevi Lehtonen, Nella Junna, Taru Tukiainen, Pertti Panula, Elisabeth Widén

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Jaakko T LeinonenThe Institute for Molecular Medicine Finland (FIMM), University of Helsinki, P.O. Box 20, Tukholmankatu 8, Helsinki, 00014, Finland.
Yu-Chia ChenDepartment of Anatomy and Neuroscience Center, University of Helsinki, P.O. Box 5 63, Haartmaninkatu 8, Helsinki, 00014, Finland.
Jana PennonenThe Institute for Molecular Medicine Finland (FIMM), University of Helsinki, P.O. Box 20, Tukholmankatu 8, Helsinki, 00014, Finland.
Leevi LehtonenThe Institute for Molecular Medicine Finland (FIMM), University of Helsinki, P.O. Box 20, Tukholmankatu 8, Helsinki, 00014, Finland.
Nella JunnaThe Institute for Molecular Medicine Finland (FIMM), University of Helsinki, P.O. Box 20, Tukholmankatu 8, Helsinki, 00014, Finland.
Taru TukiainenThe Institute for Molecular Medicine Finland (FIMM), University of Helsinki, P.O. Box 20, Tukholmankatu 8, Helsinki, 00014, Finland.
Pertti PanulaDepartment of Anatomy and Neuroscience Center, University of Helsinki, P.O. Box 5 63, Haartmaninkatu 8, Helsinki, 00014, Finland.ORCID http://orcid.org/0000-0002-1189-5132
Elisabeth WidénThe Institute for Molecular Medicine Finland (FIMM), University of Helsinki, P.O. Box 20, Tukholmankatu 8, Helsinki, 00014, Finland. elisabeth.widen@helsinki.fi.
University of Helsinki · FI

Funding

Medical Research Council MC_PC_12028Medical Research Council MC_PC_17228Medical Research Council MC_QA137853
6 · The paper itself

Abstract

Genome-wide association studies (GWAS) have recurrently associated sequence variation nearby LIN28B with pubertal timing, growth and disease. However, the biology linking LIN28B with these traits is still poorly understood. With our study, we sought to elucidate the mechanisms behind the LIN28B associations, with a special focus on studying LIN28B function at the hypothalamic-pituitary (HP) axis that is ultimately responsible for pubertal onset. Using CRISPR-Cas9 technology, we first generated lin28b knockout (KO) zebrafish. Compared to controls, the lin28b KO fish showed both accelerated growth tempo, reduced adult size and increased expression of mitochondrial genes during larval development. Importantly, data from the knockout zebrafish models and adult humans imply that LIN28B expression has potential to affect gene expression in the HP axis. Specifically, our results suggest that LIN28B expression correlates positively with the expression of ESR1 in the hypothalamus and POMC in the pituitary. Moreover, we show how the pubertal timing advancing allele (T) for rs7759938 at the LIN28B locus associates with higher testosterone levels in the UK Biobank data. Overall, we provide novel evidence that LIN28B contributes to the regulation of sex hormone pathways, which might help explain why the gene associates with several distinct traits.

Indexed as

Gene Expression Regulation, DevelopmentalAllelesAnimalsAnimals, Genetically ModifiedComputational BiologyCRISPR-Cas SystemsDatasets as TopicEstrogen Receptor alphaFemaleGene Knockdown TechniquesGene Knockout TechniquesHumansHypothalamo-Hypophyseal SystemHypothalamusMaleModels, AnimalESR1 protein, humanestrogen receptor 1, zebrafishEstrogen Receptor alphaLIN28B protein, humanlin28b protein, zebrafishpomca protein, zebrafishPro-OpiomelanocortinRNA-Binding ProteinsTestosteroneZebrafish Proteins

Identifiers

PMID31792362
PMCPMC6889388
OpenAlexW2990151824

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.