Evidence map›Paper›PMID 31792215›Full record

ArticleNature communications2019

Components of the ribosome biogenesis pathway underlie establishment of telomere length set point in Arabidopsis.

Liliia R Abdulkina, Callie Kobayashi, John T Lovell, Inna B Chastukhina, Behailu B Aklilu, Inna A Agabekian, Ana V Suescún, Lia R Valeeva, Chuluuntsetseg Nyamsuren, Galina V Aglyamova and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

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  11. Quantification of 8-International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Liliia R AbdulkinaInstitute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Republic of Tatarstan, Russia, 420008.ORCID http://orcid.org/0000-0003-4479-3324
Callie KobayashiDepartment of Biochemistry and Biophysics, Texas A&M University, 2128 TAMU, College Station, TX, 77843-2128, USA.
John T LovellGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL, 35806, USA.
Inna B ChastukhinaInstitute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Republic of Tatarstan, Russia, 420008.ORCID http://orcid.org/0000-0003-0933-2071
Behailu B AkliluDepartment of Biochemistry and Biophysics, Texas A&M University, 2128 TAMU, College Station, TX, 77843-2128, USA.ORCID http://orcid.org/0000-0001-9821-5154
Inna A AgabekianInstitute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Republic of Tatarstan, Russia, 420008.
Ana V SuescúnDepartment of Biochemistry and Biophysics, Texas A&M University, 2128 TAMU, College Station, TX, 77843-2128, USA.ORCID http://orcid.org/0000-0003-2575-8873
Lia R ValeevaInstitute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Republic of Tatarstan, Russia, 420008.
Chuluuntsetseg NyamsurenInstitute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Republic of Tatarstan, Russia, 420008.
Galina V AglyamovaDepartment of Integrative Biology, University of Texas at Austin, Austin, TX, 78712, USA.
Margarita R SharipovaInstitute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Republic of Tatarstan, Russia, 420008.ORCID http://orcid.org/0000-0001-6168-9145
Dorothy E ShippenDepartment of Biochemistry and Biophysics, Texas A&M University, 2128 TAMU, College Station, TX, 77843-2128, USA. dshippen@tamu.edu.
Thomas E JuengerDepartment of Integrative Biology, University of Texas at Austin, Austin, TX, 78712, USA. tjuenger@austin.utexas.edu.ORCID http://orcid.org/0000-0001-9550-9288
Eugene V ShakirovInstitute of Fundamental Medicine and Biology, Kazan (Volga Region) Federal University, Kazan, Republic of Tatarstan, Russia, 420008. shakirov@marshall.edu.ORCID http://orcid.org/0000-0003-2689-7410
Kazan Federal University · RUTexas A&M University · USThe University of Texas at Austin · USHudsonAlpha Institute for Biotechnology · US

Funding

Genetic and epigenetic architecture of natural telomere length variationR01GM127402 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI SHAKIROV, EUGENE V · 2018 to 2025
$2.4M
NIGMS NIH HHS R01 GM127402
6 · The paper itself

Abstract

Telomeres cap the physical ends of eukaryotic chromosomes to ensure complete DNA replication and genome stability. Heritable natural variation in telomere length exists in yeast, mice, plants and humans at birth; however, major effect loci underlying such polymorphism remain elusive. Here, we employ quantitative trait locus (QTL) mapping and transgenic manipulations to identify genes controlling telomere length set point in a multi-parent Arabidopsis thaliana mapping population. We detect several QTL explaining 63.7% of the total telomere length variation in the Arabidopsis MAGIC population. Loss-of-function mutants of the NOP2A candidate gene located inside the largest effect QTL and of two other ribosomal genes RPL5A and RPL5B establish a shorter telomere length set point than wild type. These findings indicate that evolutionarily conserved components of ribosome biogenesis and cell proliferation pathways promote telomere elongation.

Indexed as

ArabidopsisArabidopsis ProteinsChromosome MappingPolymorphism, GeneticQuantitative Trait LociRibosomesTelomereArabidopsis Proteins

Identifiers

PMID31792215
PMCPMC6889149
OpenAlexW2990833180

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.