Evidence map›Paper›PMID 31790418›Full record

ArticlePLoS neglected tropical diseases2019

Serotype distribution and antimicrobial resistance of human Salmonella enterica in Bangui, Central African Republic, from 2004 to 2013.

Sebastien Breurec, Yann Reynaud, Thierry Frank, Alain Farra, Geoffrey Costilhes, François-Xavier Weill, Simon Le Hello

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 27 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Veterinary sciences · 2024
    Review
  6. Non-typhoidalFrontiers in veterinary science · 2024
    Article
  7. Prevalence of Salmonella in Stool During the Vaccine Impact on Diarrhea in Africa (VIDA) Study, 2015-2018.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2023
    Article
  8. Monitoring of Antimicrobial Resistance ofPathogens (Basel, Switzerland) · 2023
    Article
  9. Review
  10. Intestinal carriage of invasive non-typhoidalFrontiers in microbiology · 2023
    Article
  11. Invasive non-typhoidalFrontiers in microbiology · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. Animals : an open access journal from MDPI · 2021
    Article
  16. Dissemination of Extended-Spectrum-β-Lactamase-ProducingAntimicrobial agents and chemotherapy · 2021
    Article
  17. Article
  18. Ciprofloxacin-ResistantMicroorganisms · 2020
    Article
  19. Pathotyping and Antibiotic Resistance Profiling ofBioMed research international · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Sebastien BreurecLaboratoire de Bactériologie, Institut Pasteur, Bangui, Central African Republic.ORCID 0000-0003-4188-0377
Yann ReynaudUnité Transmission, Réservoir et Diversité des Pathogènes, Institut Pasteur de Guadeloupe, Les Abymes, France.
Thierry FrankLaboratoire de Bactériologie, Institut Pasteur, Bangui, Central African Republic.
Alain FarraLaboratoire de Bactériologie, Institut Pasteur, Bangui, Central African Republic.
Geoffrey CostilhesUnité des Bactéries Pathogènes Entériques, Centre National de Référence des Escherichia coli, Shigella et Salmonella, World Health Organization Collaborative Centre for typing and antibiotic resistance of Salmonella, Institut Pasteur, Paris, France.
François-Xavier WeillUnité des Bactéries Pathogènes Entériques, Centre National de Référence des Escherichia coli, Shigella et Salmonella, World Health Organization Collaborative Centre for typing and antibiotic resistance of Salmonella, Institut Pasteur, Paris, France.
Simon Le HelloUnité des Bactéries Pathogènes Entériques, Centre National de Référence des Escherichia coli, Shigella et Salmonella, World Health Organization Collaborative Centre for typing and antibiotic resistance of Salmonella, Institut Pasteur, Paris, France.
Institut Pasteur · FRInstitut Pasteur de Bangui · CFInstitut Pasteur de la Guadeloupe · GP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLimited epidemiological and antimicrobial resistance data are available on Salmonella enterica from sub-Saharan Africa. We determine the prevalence of resistance to antibiotics in isolates in the Central African Republic (CAR) between 2004 and 2013 and the genetic basis for resistance to third-generation cephalosporin (C3G). METHODOLOGY/PRINCIPAL

findingsA total of 582 non-duplicate human clinical isolates were collected. The most common serotype was Typhimurium (n = 180, 31% of the isolates). A randomly selected subset of S. Typhimurium isolates were subtyped by clustered regularly interspaced short palindromic repeat polymorphism (CRISPOL) typing. All but one invasive isolate tested (66/68, 96%) were associated with sequence type 313. Overall, the rates of resistance were high to traditional first-line drugs (18-40%) but low to many other antimicrobials, including fluoroquinolones (one resistant isolate) and C3G (only one ESBL-producing isolate). The extended-spectrum beta-lactamase (ESBL)-producing isolate and three additional ESBL isolates from West Africa were studied by whole genome sequencing. The blaCTX-M-15 gene and the majority of antimicrobial resistance genes found in the ESBL isolate were present in a large conjugative IncHI2 plasmid highly similar (> 99% nucleotide identity) to ESBL-carrying plasmids found in Kenya (S. Typhimurium ST313) and also in West Africa (serotypes Grumpensis, Havana, Telelkebir and Typhimurium). CONCLUSIONS/SIGNIFICANCE: Although the prevalence of ESBL-producing Salmonella isolates was low in CAR, we found that a single IncHI2 plasmid-carrying blaCTX-M-15 was widespread among Salmonella serotypes from sub-Saharan Africa, which is of concern.

Indexed as

Drug Resistance, BacterialSerogroupAnti-Bacterial AgentsCentral African RepublicGenes, BacterialGenotypeGenotyping TechniquesHumansPlasmidsPrevalenceRetrospective StudiesSalmonella entericaSalmonella InfectionsAnti-Bacterial Agents

Identifiers

PMID31790418
PMCPMC6907862
OpenAlexW2990203740

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.