Evidence map›Paper›PMID 31788206›Full record

ArticleEcology and evolution2019

Effects of rhizoma peanut cultivars (

Xiao-Bo Wang, Chih-Ming Hsu, José C B Dubeux, Cheryl Mackowiak, Ann Blount, Xing-Guo Han, Hui-Ling Liao

Abstract read
In one paragraph

Article in Ecology and evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

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  17. Effects of rhizoma peanut cultivars (Ecology and evolution · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiao-Bo WangNorth Florida Research and Education Center University of Florida Quincy FL USA.ORCID https://orcid.org/0000-0003-2278-2464
Chih-Ming HsuNorth Florida Research and Education Center University of Florida Quincy FL USA.
José C B DubeuxNorth Florida Research and Education Center University of Florida Marianna FL USA.
Cheryl MackowiakNorth Florida Research and Education Center University of Florida Quincy FL USA.
Ann BlountNorth Florida Research and Education Center University of Florida Marianna FL USA.
Xing-Guo HanErguna Forest-Steppe Ecotone Research Station Institute of Applied Ecology Chinese Academy of Sciences Shenyang China.
Hui-Ling LiaoNorth Florida Research and Education Center University of Florida Quincy FL USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is a growing awareness of the importance of soil microorganisms in agricultural management practices. Currently, much less is known about whether different crop cultivar has an effect on the taxonomic structure and diversity, and specific functions of soil bacterial communities. Here, we examined the changes of the diversity and composition and enzyme-encoding nitrogenase genes in a long-term field experiment with seven different rhizoma peanut cultivars in southeastern USA, coupling high-throughput 16S rRNA gene sequencing and the sequence-based function prediction with Tax4Fun. Of the 32 phyla detected (Proteobacteria class), 13 were dominant: Acidobacteria, Alphaproteobacteria, Actinobacteria, Betaproteobacteria, Bacteroidetes, Verrucomicrobia, Gammaproteobacteria, Deltaproteobacteria, Gemmatimonadetes, Firmicutes, Nitrospirae, Chloroflexi, and Planctomycetes (relative abundance >1%). We found no evidence that the diversity and composition of bacterial communities were significantly different among different cultivars, but the abundance of some dominant bacterial groups that have N-fixation potentials (at broad or fine taxonomic level) and predicted abundances of some enzyme-encoding nitrogenase genes showed significant across-cultivar differences. The nitrogenase genes were notably abundant in Florigraze and Latitude soils while remarkably lower in Arbook and UF_TITO soils when compared with other cultivars, indicating different nitrogen fixation potentials among different cultivars. The findings also suggest that the abundance of certain bacterial taxa and the specific function bacteria perform in ecosystems can have an inherent association. Our study is helpful to understand how microbiological responses and feedback to different plant genotypes through the variation in structure and function of their communities in the rhizosphere.

Indexed as

bacterial diversitybiological nitrogen fixationfunctional profilesgrasslandssoil microorganisms

Identifiers

PMID31788206
PMCPMC6875664

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.