Evidence map›Paper›PMID 31785788›Full record

ArticleAmerican journal of human genetics2019

Validation Studies for Single Circulating Trophoblast Genetic Testing as a Form of Noninvasive Prenatal Diagnosis.

Liesbeth Vossaert, Qun Wang, Roseen Salman, Anne K McCombs, Vipulkumar Patel, Chunjing Qu, Michael A Mancini, Dean P Edwards, Anna Malovannaya, Pengfei Liu and 7 more

Open access · hybridAbstract readValidation Study
In one paragraph

Article in American journal of human genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
17.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 61 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
  7. Review
  8. Whole-Genome Amplification on Single Circulating Trophoblast Cell.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Genetics in prenatal diagnosis.Singapore medical journal · 2023
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Liesbeth VossaertDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Qun WangDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Roseen SalmanDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Anne K McCombsDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.
Vipulkumar PatelBaylor Genetics, Houston, TX 77021, USA.
Chunjing QuBaylor Genetics, Houston, TX 77021, USA.
Michael A ManciniDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Dean P EdwardsDepartment of Molecular and Cellular Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Anna MalovannayaDepartment of Biochemistry, Baylor College of Medicine, Houston, TX 77030, USA.
Pengfei LiuDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Genetics, Houston, TX 77021, USA.
Chad A ShawDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Genetics, Houston, TX 77021, USA.
Brynn LevyDepartment of Pathology and Cell Biology, Columbia University Medical Center, New York City, NY 10032, USA.
Ronald J WapnerDepartment of Obstetrics and Gynecology, Columbia University Medical Center, New York City, NY 10032, USA.
Weimin BiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Baylor Genetics, Houston, TX 77021, USA.
Amy M BremanDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Ignatia B Van den VeyverDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Department of Obstetrics and Gynecology, Baylor College of Medicine, Houston, TX 77030, USA; Texas Children's Hospital, Houston, TX 77030, USA.
Arthur L BeaudetDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA; Texas Children's Hospital, Houston, TX 77030, USA. Electronic address: abeaudet@bcm.edu.
Baylor College of Medicine · USBaylor Genetics · USColumbia University Irving Medical Center · USIndiana University School of Medicine

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
NCI NIH HHS P30 CA125123
6 · The paper itself

Abstract

It has long been appreciated that genetic analysis of fetal or trophoblast cells in maternal blood could revolutionize prenatal diagnosis. We implemented a protocol for single circulating trophoblast (SCT) testing using positive selection by magnetic-activated cell sorting and single-cell low-coverage whole-genome sequencing to detect fetal aneuploidies and copy-number variants (CNVs) at ∼1 Mb resolution. In 95 validation cases, we identified on average 0.20 putative trophoblasts/mL, of which 55% were of high quality and scorable for both aneuploidy and CNVs. We emphasize the importance of analyzing individual cells because some cells are apoptotic, in S-phase, or otherwise of poor quality. When two or more high-quality trophoblast cells were available for singleton pregnancies, there was complete concordance between all trophoblasts unless there was evidence of confined placental mosaicism. SCT results were highly concordant with available clinical data from chorionic villus sampling (CVS) or amniocentesis procedures. Although determining the exact sensitivity and specificity will require more data, this study further supports the potential for SCT testing to become a diagnostic prenatal test.

Indexed as

Genetic MarkersAdultChromosome DisordersDNA Copy Number VariationsFemaleHumansMaleNoninvasive Prenatal TestingPlacentaPregnancySingle-Cell AnalysisTrophoblastsYoung AdultGenetic Markerscell-based NIPTfetalmosaisicmnoninvasive prenatal diagnosissingle cell analysistrophoblast

Identifiers

PMID31785788
PMCPMC6904821
OpenAlexW2991505993

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.