Evidence map›Paper›PMID 31784768›Full record

ArticleCurrent genetics2020

Distinct associations of the Saccharomyces cerevisiae Rad9 protein link Mac1-regulated transcription to DNA repair.

Kalliopi Gkouskou, George S Fragiadakis, Alexandra Voutsina, Despina Alexandraki

Abstract read
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In one paragraph

Article in Current genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. The Molecular Mechanism of Yellow Mushroom (Frontiers in microbiology · 2022
    Article
  3. Copper metabolism in Saccharomyces cerevisiae: an update.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2021
    Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Kalliopi GkouskouDepartment of Biology, University of Crete, Vasilika Vouton, P.O.Box 2208, 710 03, Heraklion, Crete, Greece.
George S FragiadakisInstitute of Molecular Biology & Biotechnology, Foundation for Research and Technology-Hellas, N. Plastira 100, 70013, Heraklion, Crete, Greece.
Alexandra VoutsinaInstitute of Molecular Biology & Biotechnology, Foundation for Research and Technology-Hellas, N. Plastira 100, 70013, Heraklion, Crete, Greece.
Despina AlexandrakiDepartment of Biology, University of Crete, Vasilika Vouton, P.O.Box 2208, 710 03, Heraklion, Crete, Greece. alexandr@imbb.forth.gr.
University of Crete · GRFoundation for Research and Technology Hellas · GR

Funding

Greek Ministry of Development-GSRT PENED 01ED119Greek Ministry of Education PYTHAGORAS grant 89184
6 · The paper itself

Abstract

While it is known that ScRad9 DNA damage checkpoint protein is recruited to damaged DNA by recognizing specific histone modifications, here we report a different way of Rad9 recruitment on chromatin under non DNA damaging conditions. We found Rad9 to bind directly with the copper-modulated transcriptional activator Mac1, suppressing both its DNA binding and transactivation functions. Rad9 was recruited to active Mac1-target promoters (CTR1, FRE1) and along CTR1 coding region following the association pattern of RNA polymerase (Pol) II. Hir1 histone chaperone also interacted directly with Rad9 and was partly required for its localization throughout CTR1 gene. Moreover, Mac1-dependent transcriptional initiation was necessary and sufficient for Rad9 recruitment to the heterologous ACT1 coding region. In addition to Rad9, Rad53 kinase also localized to CTR1 coding region in a Rad9-dependent manner. Our data provide an example of a yeast DNA-binding transcriptional activator that interacts directly with a DNA damage checkpoint protein in vivo and is functionally restrained by this protein, suggesting a new role for Rad9 in connecting factors of the transcription machinery with the DNA repair pathway under unchallenged conditions.

Indexed as

DNA DamageDNA RepairPromoter Regions, GeneticCell Cycle ProteinsChromatinCopper Transporter 1FMN ReductaseNuclear ProteinsPhosphorylationSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsCell Cycle ProteinsChromatinCopper Transporter 1CTR1 protein, S cerevisiaeferric citrate iron reductaseFMN ReductaseMAC1 protein, S cerevisiaeNuclear Proteinsrad9 proteinSaccharomyces cerevisiae ProteinsTranscription FactorsCheckpoint protein recruitmentHir1Mac1Metal-regulated transcriptionRad53Rad9

Identifiers

PMID31784768
OpenAlexW2991653040

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.