Evidence map›Paper›PMID 31784538›Full record

ArticleNature communications2019

Myeloid lineage enhancers drive oncogene synergy in CEBPA/CSF3R mutant acute myeloid leukemia.

Theodore P Braun, Mariam Okhovat, Cody Coblentz, Sarah A Carratt, Amy Foley, Zachary Schonrock, Brittany M Curtiss, Kimberly Nevonen, Brett Davis, Brianna Garcia and 18 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

28 authors at 5 institutions in 2 countries.

Theodore P BraunKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.ORCID http://orcid.org/0000-0002-6248-2143
Mariam OkhovatKnight Cardiovascular Institute, Oregon Health & Science University, Portland, OR, 97239, USA.
Cody CoblentzKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.
Sarah A CarrattKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.ORCID http://orcid.org/0000-0003-2493-6789
Amy FoleyKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.
Zachary SchonrockKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.
Brittany M CurtissKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.
Kimberly NevonenKnight Cardiovascular Institute, Oregon Health & Science University, Portland, OR, 97239, USA.ORCID http://orcid.org/0000-0003-0198-1624
Brett DavisKnight Cardiovascular Institute, Oregon Health & Science University, Portland, OR, 97239, USA.ORCID http://orcid.org/0000-0001-7985-1921
Brianna GarciaKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.
Dorian LaTochaKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.
Benjamin R WeederProgram in Molecular and Cellular Biology, Oregon Health & Science University, Portland, OR, 97239, USA.ORCID http://orcid.org/0000-0002-4128-5861
Michal R GrzadkowskiComputational Biology Program, Oregon Health & Science University, Portland, OR, 97239, USA.
Joey C EstabrookComputational Biology Program, Oregon Health & Science University, Portland, OR, 97239, USA.
Hannah G ManningComputational Biology Program, Oregon Health & Science University, Portland, OR, 97239, USA.
Kevin Watanabe-SmithKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.
Sophia JengDivision of Bioinformatics and Computational Biology, Oregon Health & Science University, Portland, OR, 97239, USA.
Jenny L SmithClinical Research Division, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave N, Seattle, WA, 98109, USA.
Amanda R LeontiClinical Research Division, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave N, Seattle, WA, 98109, USA.
Rhonda E RiesClinical Research Division, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave N, Seattle, WA, 98109, USA.
Shannon McWeeneyKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.ORCID http://orcid.org/0000-0001-8333-6607
Cristina Di GenuaMRC Molecular Haematology Unit, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, Headley Way, Oxford, OX3 9DS, UK.
Roy DrissenMRC Molecular Haematology Unit, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, Headley Way, Oxford, OX3 9DS, UK.ORCID http://orcid.org/0000-0002-8574-5014
Claus NerlovMRC Molecular Haematology Unit, MRC Weatherall Institute of Molecular Medicine, John Radcliffe Hospital, Headley Way, Oxford, OX3 9DS, UK.ORCID http://orcid.org/0000-0002-0544-735X
Soheil MeshinchiClinical Research Division, Fred Hutchinson Cancer Research Center, 1100 Fairview Ave N, Seattle, WA, 98109, USA.
Lucia CarboneKnight Cardiovascular Institute, Oregon Health & Science University, Portland, OR, 97239, USA.
Brian J DrukerKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA.ORCID http://orcid.org/0000-0001-8331-8206
Julia E MaxsonKnight Cancer Institute, Oregon Health & Science University, Portland, OR, 97239, USA. maxsonj@ohsu.edu.
Oregon Health & Science University · USFred Hutch Cancer Center · USJohn Radcliffe Hospital · GBHoward Hughes Medical Institute · USUniversity of Washington · US

Funding

COG FOREIGN ACCRUALU10CA098543 · NCI · NATIONAL CHILDHOOD CANCER FOUNDATION · PI ADAMSON, PETER C. · 2003 to 2013
$335.5M
Upgrade of confocal microscopy at the Oregon National Primate Research CenterP51OD011092 · OD · OREGON HEALTH & SCIENCE UNIVERSITY · PI Bonnie J. Nagel · 2012 to 2026
$203.9M
Tumor Intrinsic and Microenvironmental Mechanisms Driving Drug Combination Efficacy and Resistance in AMLU54CA224019 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI Jeffrey Wallace Tyner · 2017 to 2026
$13.9M
Oregon Clinical and Translational Research Institute KL2 SupplementKL2TR002370 · NCATS · OREGON HEALTH & SCIENCE UNIVERSITY · PI Catherine Lee Hough · 2017 to 2026
$10.1M
Functional Genomic Discovery of Pathway Targeted and Immune Modulatory Therapeutic Combinations in Hematologic MalignanciesU01CA217862 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI DRUKER, BRIAN J, TYNER, JEFFREY WALLACE · 2017 to 2021
$5.3M
Comparative and functional analysis of conservation and rearrangement of topologically associating domains across mammals.R01HG010333 · NHGRI · OREGON HEALTH & SCIENCE UNIVERSITY · PI CARBONE, LUCIA · 2018 to 2021
$2.8M
Pathogenic Mechanisms of CSF3R Mutations in LeukemiaR00CA190605 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI MAXSON, JULIA E · 2016 to 2018
$733k
Medical Research Council G0701761Medical Research Council G0900892Medical Research Council MC_UU_00016/7Medical Research Council MC_UU_12009/7NCATS NIH HHS KL2 TR002370NCI NIH HHS R00 CA190605NCI NIH HHS U01 CA217862NCI NIH HHS U10 CA098543NCI NIH HHS U54 CA224019NHGRI NIH HHS R01 HG010333NIH HHS P51 OD011092
6 · The paper itself

Abstract

Acute Myeloid Leukemia (AML) develops due to the acquisition of mutations from multiple functional classes. Here, we demonstrate that activating mutations in the granulocyte colony stimulating factor receptor (CSF3R), cooperate with loss of function mutations in the transcription factor CEBPA to promote acute leukemia development. The interaction between these distinct classes of mutations occurs at the level of myeloid lineage enhancers where mutant CEBPA prevents activation of a subset of differentiation associated enhancers. To confirm this enhancer-dependent mechanism, we demonstrate that CEBPA mutations must occur as the initial event in AML initiation. This improved mechanistic understanding will facilitate therapeutic development targeting the intersection of oncogene cooperativity.

Indexed as

AnimalsCCAAT-Enhancer-Binding ProteinsCell DifferentiationCell LineageHumansK562 CellsLeukemia, Myeloid, AcuteLoss of Function MutationMiceMutationReceptors, Colony-Stimulating FactorCCAAT-Enhancer-Binding ProteinsCEBPA protein, humanCEBPA protein, mouseCSF3R protein, humanCsf3r protein, mouseReceptors, Colony-Stimulating Factor

Identifiers

PMID31784538
PMCPMC6884457
OpenAlexW2990499535

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.