Evidence map›Paper›PMID 31784519›Full record

ArticleNature communications2019

7-Deazaguanine modifications protect phage DNA from host restriction systems.

Geoffrey Hutinet, Witold Kot, Liang Cui, Roman Hillebrand, Seetharamsingh Balamkundu, Shanmugavel Gnanakalai, Ramesh Neelakandan, Alexander B Carstens, Chuan Fa Lui, Denise Tremblay and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 119 citations in OpenAlex.

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  20. Pathogen-Phage Geomapping to Overcome Resistance.bioRxiv : the preprint server for biology · 2025
    Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 10 institutions in 5 countries.

Geoffrey HutinetDepartment of Microbiology and Cell Science, University of Florida, Gainesville, FL, 32611, USA. ghutinet@ufl.edu.ORCID http://orcid.org/0000-0002-1269-6127
Witold KotDepartment of Environmental Science, Aarhus University, Roskilde, Denmark.
Liang CuiSingapore-MIT Alliance for Research and Technology, Antimicrobial Resistance Interdisciplinary Research Group, Campus for Research Excellence and Technological Enterprise, Singapore, 138602, Singapore.
Roman HillebrandDepartment of Biological Engineering and Center for Environmental Health Sciences, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.
Seetharamsingh BalamkunduSingapore-MIT Alliance for Research and Technology, Antimicrobial Resistance Interdisciplinary Research Group, Campus for Research Excellence and Technological Enterprise, Singapore, 138602, Singapore.
Shanmugavel GnanakalaiSingapore-MIT Alliance for Research and Technology, Antimicrobial Resistance Interdisciplinary Research Group, Campus for Research Excellence and Technological Enterprise, Singapore, 138602, Singapore.
Ramesh NeelakandanSingapore-MIT Alliance for Research and Technology, Antimicrobial Resistance Interdisciplinary Research Group, Campus for Research Excellence and Technological Enterprise, Singapore, 138602, Singapore.
Alexander B CarstensDepartment of Environmental Science, Aarhus University, Roskilde, Denmark.
Chuan Fa LuiSchool of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore, 637551, Singapore.ORCID http://orcid.org/0000-0001-7433-2081
Denise TremblayDépartement de Biochimie, Microbiologie et de Bio-informatique, Faculté des Sciences et de Génie, Université Laval, Québec City, QC, G1V 0A6, Canada.
Deborah Jacobs-SeraPittsburgh Bacteriophage Institute and Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, 15260, USA.ORCID http://orcid.org/0000-0001-7838-3257
Mandana SassanfarDepartment of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.
Yan-Jiun LeeResearch Department, New England Biolabs, Ipswich, MA, 01938, USA.
Peter WeigeleResearch Department, New England Biolabs, Ipswich, MA, 01938, USA.ORCID http://orcid.org/0000-0003-3696-4541
Sylvain MoineauDépartement de Biochimie, Microbiologie et de Bio-informatique, Faculté des Sciences et de Génie, Université Laval, Québec City, QC, G1V 0A6, Canada.ORCID http://orcid.org/0000-0002-2832-5101
Graham F HatfullPittsburgh Bacteriophage Institute and Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, 15260, USA.ORCID http://orcid.org/0000-0002-6705-6821
Peter C DedonSingapore-MIT Alliance for Research and Technology, Antimicrobial Resistance Interdisciplinary Research Group, Campus for Research Excellence and Technological Enterprise, Singapore, 138602, Singapore.ORCID http://orcid.org/0000-0003-0011-3067
Lars H HansenDepartment of Environmental Science, Aarhus University, Roskilde, Denmark.
Valérie de Crécy-LagardDepartment of Microbiology and Cell Science, University of Florida, Gainesville, FL, 32611, USA. vcrecy@ufl.edu.ORCID http://orcid.org/0000-0002-9955-3785
Singapore-MIT Alliance for Research and Technology · SGAarhus University · DKNew England Biolabs (United States) · USUniversité Laval · CAUniversity of Florida · USUniversity of Pittsburgh · USCenter for Environmental Health · USMassachusetts Institute of Technology · USNanyang Technological University · SGNitto (Japan) · JP

Funding

Synthesis and function of Queuosine in BacteriaR01GM070641 · NIGMS · UNIVERSITY OF FLORIDA · PI DE CRECY-LAGARD, VALERIE A · 2006 to 2023
$5.3M
NIGMS NIH HHS R01 GM070641
6 · The paper itself

Abstract

Genome modifications are central components of the continuous arms race between viruses and their hosts. The archaeosine base (G

Indexed as

Archaeal VirusesBacteriophagesDNADNA Restriction EnzymesGuaninePyrimidinonesPyrroles7-(aminomethyl)-7-deazaguanine7-cyano-7-deazaguanine7-deazaguanineDNADNA Restriction EnzymesGuaninePyrimidinonesPyrroles

Identifiers

PMID31784519
PMCPMC6884629
OpenAlexW2989820916

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.