Evidence map›Paper›PMID 31784357›Full record

ArticleMolecular cell2020

Native Chromatin Proteomics Reveals a Role for Specific Nucleoporins in Heterochromatin Organization and Maintenance.

Nahid Iglesias, Joao A Paulo, Antonis Tatarakis, Xiaoyi Wang, Amanda L Edwards, Natarajan V Bhanu, Benjamin A Garcia, Wilhelm Haas, Steven P Gygi, Danesh Moazed

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 114 citations in OpenAlex.

  1. Article
  2. Expanding roles of cGAS-STING signaling in neuroinflammation.The Journal of clinical investigation · 2026
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  6. Structure, function and assembly of nuclear pore complexes.Nature reviews. Molecular cell biology · 2026
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  7. Viral interference of nucleocytoplasmic transport.The Journal of biological chemistry · 2025
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  11. RiboCop surveils pre-rRNA processing by Dicer in cellular quiescence.bioRxiv : the preprint server for biology · 2025
    Article
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  14. Review
  15. A meiotic driver hijacks an epigenetic reader to disrupt mitosis in noncarrier offspring.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  16. Clr4Nature communications · 2024
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  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Nahid IglesiasHoward Hughes Medical Institute, Department of Cell Biology, Harvard Medical School, Boston, MA, USA.
Joao A PauloDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.
Antonis TatarakisHoward Hughes Medical Institute, Department of Cell Biology, Harvard Medical School, Boston, MA, USA.
Xiaoyi WangHoward Hughes Medical Institute, Department of Cell Biology, Harvard Medical School, Boston, MA, USA.
Amanda L EdwardsMassachusetts General Hospital Cancer Center and Department of Medicine, Harvard Medical School, Charlestown, MA, USA.
Natarajan V BhanuDepartment of Biochemistry and Biophysics, Epigenetics Program, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Benjamin A GarciaDepartment of Biochemistry and Biophysics, Epigenetics Program, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Wilhelm HaasDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA; Massachusetts General Hospital Cancer Center and Department of Medicine, Harvard Medical School, Charlestown, MA, USA.
Steven P GygiDepartment of Cell Biology, Harvard Medical School, Boston, MA, USA.
Danesh MoazedHoward Hughes Medical Institute, Department of Cell Biology, Harvard Medical School, Boston, MA, USA. Electronic address: danesh@hms.harvard.edu.
Harvard University · USHoward Hughes Medical Institute · USMassachusetts General Hospital · USUniversity of Pennsylvania · US

Funding

Shared Resources Core 2: Quantitative Proteomics CoreP01CA196539 · NCI · ROCKEFELLER UNIVERSITY · PI GARCIA, BENJAMIN A · 2015 to 2024
$17.6M
RNAi-mediated Targeting of Hetorochromatin AssemblyR01GM072805 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MOAZED, DANESH · 2005 to 2025
$6.9M
Advancing Multiplexed Isobaric Tag-based Strategies for Proteome ProfilingR01GM132129 · NIGMS · HARVARD MEDICAL SCHOOL · PI PAULO, JOAO A · 2019 to 2023
$1.7M
Understanding the Role of Combinatorial Histone PTM PatternsR01GM110174 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI GARCIA, BENJAMIN A · 2014 to 2017
$1.3M
Resolving the role of nicotine-mediated phosphorylation on pancreatic fibrosisK01DK098285 · NIDDK · HARVARD MEDICAL SCHOOL · PI PAULO, JOAO A · 2013 to 2017
$638k
NCI NIH HHS P01 CA196539NIDDK NIH HHS K01 DK098285NIGMS NIH HHS R01 GM072805NIGMS NIH HHS R01 GM110174NIGMS NIH HHS R01 GM132129
6 · The paper itself

Abstract

Spatially and functionally distinct domains of heterochromatin and euchromatin play important roles in the maintenance of chromosome stability and regulation of gene expression, but a comprehensive knowledge of their composition is lacking. Here, we develop a strategy for the isolation of native Schizosaccharomyces pombe heterochromatin and euchromatin fragments and analyze their composition by using quantitative mass spectrometry. The shared and euchromatin-specific proteomes contain proteins involved in DNA and chromatin metabolism and in transcription, respectively. The heterochromatin-specific proteome includes all proteins with known roles in heterochromatin formation and, in addition, is enriched for subsets of nucleoporins and inner nuclear membrane (INM) proteins, which associate with different chromatin domains. While the INM proteins are required for the integrity of the nucleolus, containing ribosomal DNA repeats, the nucleoporins are required for aggregation of heterochromatic foci and epigenetic inheritance. The results provide a comprehensive picture of heterochromatin-associated proteins and suggest a role for specific nucleoporins in heterochromatin function.

Indexed as

Cell NucleusChromatinChromatin Assembly and DisassemblyDNA, RibosomalEpigenesis, GeneticEuchromatinHeterochromatinNuclear Pore Complex ProteinsProteomicsSchizosaccharomycesSchizosaccharomyces pombe ProteinsTranscription, GeneticChromatinDNA, RibosomalEuchromatinHeterochromatinNuclear Pore Complex ProteinsSchizosaccharomyces pombe ProteinsBdf1Clr4epigenetic inheritanceH3K9meHP1INM proteinsNPCnucleoporinsSUV39HSwi6

Identifiers

PMID31784357
PMCPMC7224636
OpenAlexW2990005557

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.