Evidence map›Paper›PMID 31783860›Full record

ArticleReproductive biology and endocrinology : RB&E2019

Analysis of key genes and their functions in placental tissue of patients with gestational diabetes mellitus.

Yuxia Wang, Haifeng Yu, Fangmei Liu, Xiue Song

Open access · goldAbstract read
In one paragraph

Article in Reproductive biology and endocrinology : RB&E, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yuxia WangDepartment of Gynecology, Jinan Central Hospital, Jinan City, 250013, Shandong Province, China.
Haifeng YuDepartment of Obstetrics, Jinan Central Hospital, No. 105 Jiefang Road, Lixia District, Jinan City, 250013, Shandong Province, China.
Fangmei LiuDepartment of Obstetrics, Jinan Central Hospital, No. 105 Jiefang Road, Lixia District, Jinan City, 250013, Shandong Province, China.
Xiue SongDepartment of Obstetrics, Jinan Central Hospital, No. 105 Jiefang Road, Lixia District, Jinan City, 250013, Shandong Province, China. xiuesss19@163.com.
Jinan Central Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThis study was aimed at screening out the potential key genes and pathways associated with gestational diabetes mellitus (GDM).

methodsThe GSE70493 dataset used for this study was obtained from the Gene Expression Omnibus database. Differentially expressed genes (DEGs) in the placental tissue of women with GDM in relation to the control tissue samples were identified and submitted to protein-protein interaction (PPI) network analysis and subnetwork module mining. Functional enrichment analyses of the PPI network and subnetworks were subsequently carried out. Finally, the integrated miRNA-transcription factor (TF)-DEG regulatory network was analyzed.

resultsIn total, 238 DEGs were identified, of which 162 were upregulated and 76 were downregulated. Through PPI network construction, 108 nodes and 278 gene pairs were obtained, from which chemokine (C-X-C motif) ligand 9 (CXCL9), CXCL10, protein tyrosine phosphatase, receptor type C (PTPRC), and human leukocyte antigen (HLA) were screened out as hub genes. Moreover, genes associated with the immune-related pathway and immune responses were found to be significantly enriched in the process of GDM. Finally, miRNAs and TFs that target the DEGs were predicted.

conclusionsFour candidate genes (viz., CXCL9, CXCL10, PTPRC, and HLA) are closely related to GDM. miR-223-3p, miR-520, and thioredoxin-binding protein may play important roles in the pathogenesis of this disease.

Indexed as

Gene Regulatory NetworksCarrier ProteinsChemokine CXCL10Chemokine CXCL9Diabetes, GestationalFemaleGene Expression ProfilingHLA AntigensHumansLeukocyte Common AntigensMicroRNAsPlacentaPregnancyProtein Interaction MapsProtein Tyrosine PhosphatasesCarrier ProteinsChemokine CXCL10Chemokine CXCL9HLA AntigensLeukocyte Common AntigensMicroRNAsProtein Tyrosine PhosphatasesPTPRC protein, humanTXNIP protein, humanDifferentially expressed genesGestational diabetes mellitusIntegrated regulatory networkProtein-protein interaction networkTranscription factors

Identifiers

PMID31783860
PMCPMC6884804
OpenAlexW2991351358

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.