Evidence map›Paper›PMID 31781713›Full record

ArticleOrganic & biomolecular chemistry2019

Photoaffinity probes for nematode pheromone receptor identification.

Ying K Zhang, Douglas K Reilly, Jingfang Yu, Jagan Srinivasan, Frank C Schroeder

Open access · greenAbstract read
In one paragraph

Article in Organic & biomolecular chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Ying K ZhangBoyce Thompson Institute and Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY, USA. fs31@cornell.edu.
Douglas K Reilly
Jingfang Yu
Jagan Srinivasan
Frank C Schroeder
Cornell University · USWorcester Polytechnic Institute · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Small molecule signaling in C. elegansR35GM131877 · NIGMS · BOYCE THOMPSON INST FOR PLANT RESEARCH · PI Frank Clemens Schroeder · 2019 to 2026
$5.0M
Functional connectome of sex-specific processing of social cuesR01DC016058 · NIDCD · WORCESTER POLYTECHNIC INSTITUTE · PI SRINIVASAN, JAGAN · 2017 to 2021
$1.6M
Starvation-induced social behavior in C. elegansR01GM113692 · NIGMS · BOYCE THOMPSON INST FOR PLANT RESEARCH · PI SCHROEDER, FRANK CLEMENS · 2016 to 2018
$1.1M
NIDCD NIH HHS R01 DC016058NIGMS NIH HHS R01 GM113692NIGMS NIH HHS R35 GM131877NIH HHS P40 OD010440
6 · The paper itself

Abstract

Identification of pheromone receptors plays a central role for uncovering signaling pathways that underlie chemical communication in animals. Here, we describe the synthesis and bioactivity of photoaffinity probes for the ascaroside ascr#8, a sex-pheromone of the model nematode, Caenorhabditis elegans. Structure-activity studies guided incorporation of alkyne- and diazirine-moieties and revealed that addition of functionality in the sidechain of ascr#8 was well tolerated, whereas modifications to the ascarylose moiety resulted in loss of biological activity. Our study will guide future probe design and provides a basis for pheromone receptor identification via photoaffinity labeling in C. elegans.

Indexed as

AnimalsCaenorhabditis elegansMolecular StructureNematodaPhotoaffinity LabelsReceptors, PheromonePhotoaffinity LabelsReceptors, Pheromone

Identifiers

PMID31781713
PMCPMC6961461
OpenAlexW2991093265

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.