Evidence map›Paper›PMID 31781186›Full record

ArticleGastroenterology research and practice2019

Mutation Profiling of Premalignant Colorectal Neoplasia.

Jakub Karczmarski, Krzysztof Goryca, Jacek Pachlewski, Michalina Dabrowska, Kazimiera Pysniak, Agnieszka Paziewska, Maria Kulecka, Malgorzata Lenarcik, Andrzej Mroz, Michal Mikula and 1 more

Open access · goldAbstract read
In one paragraph

Article in Gastroenterology research and practice, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Jakub KarczmarskiDepartment of Genetics, Maria Sklodowska-Curie Institute-Oncology Center, 02-781 Warsaw, Poland.
Krzysztof GorycaDepartment of Genetics, Maria Sklodowska-Curie Institute-Oncology Center, 02-781 Warsaw, Poland.
Jacek PachlewskiDepartment of Gastroenterology, Hepatology and Clinical Oncology, Center for Postgraduate Medical Education, 01-813 Warsaw, Poland.
Michalina DabrowskaDepartment of Genetics, Maria Sklodowska-Curie Institute-Oncology Center, 02-781 Warsaw, Poland.
Kazimiera PysniakDepartment of Genetics, Maria Sklodowska-Curie Institute-Oncology Center, 02-781 Warsaw, Poland.
Agnieszka PaziewskaDepartment of Gastroenterology, Hepatology and Clinical Oncology, Center for Postgraduate Medical Education, 01-813 Warsaw, Poland.
Maria KuleckaDepartment of Gastroenterology, Hepatology and Clinical Oncology, Center for Postgraduate Medical Education, 01-813 Warsaw, Poland.
Malgorzata LenarcikDepartment of Gastroenterology, Hepatology and Clinical Oncology, Center for Postgraduate Medical Education, 01-813 Warsaw, Poland.
Andrzej MrozDepartment of Pathology and Laboratory Diagnostics, Maria Sklodowska-Curie Institute-Oncology Center, 02-781 Warsaw, Poland.
Michal MikulaDepartment of Genetics, Maria Sklodowska-Curie Institute-Oncology Center, 02-781 Warsaw, Poland.ORCID https://orcid.org/0000-0003-3447-7328
Jerzy OstrowskiDepartment of Genetics, Maria Sklodowska-Curie Institute-Oncology Center, 02-781 Warsaw, Poland.ORCID https://orcid.org/0000-0002-1450-8564
Postgraduate School of Molecular Medicine · PLThe Maria Sklodowska-Curie National Research Institute of Oncology · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accumulation of allelic variants in genes that regulate cellular proliferation, differentiation, and apoptosis may result in expansion of the aberrant intestinal epithelium, generating adenomas. Herein, we compared the mutation profiles of conventional colorectal adenomas (CNADs) across stages of progression towards early carcinoma. DNA was isolated from 17 invasive adenocarcinomas (ACs) and 58 large CNADs, including 19 with low-grade dysplasia (LGD), 21 with LGD adjacent to areas of high-grade dysplasia and/or carcinoma (LGD-H), and 28 with high-grade dysplasia (HGD). Ion AmpliSeq Comprehensive Cancer Panel libraries were prepared and sequenced on the Ion Proton. We identified 956 unique allelic variants; of these, 499 were considered nonsynonymous variants. Eleven genes (

Identifiers

PMID31781186
PMCPMC6875414
OpenAlexW2989532925

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.