Evidence map›Paper›PMID 31776704›Full record

ArticlePlanta2019

Comparative proteomic analysis of resistant and susceptible potato cultivars during Synchytrium endobioticum infestation.

Katarzyna Szajko, Jarosław Plich, Jarosław Przetakiewicz, Dorota Sołtys-Kalina, Waldemar Marczewski

Abstract read
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In one paragraph

Article in Planta, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.5field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Katarzyna SzajkoPlant Breeding and Acclimatization Institute-National, Research Institute, Młochów Research Center, Platanowa 19, 05-831, Młochów, Poland.
Jarosław PlichPlant Breeding and Acclimatization Institute-National, Research Institute, Młochów Research Center, Platanowa 19, 05-831, Młochów, Poland.
Jarosław PrzetakiewiczPlant Breeding and Acclimatization Institute-National Research Institute, Radzików, 05-870, Błonie, Poland.
Dorota Sołtys-KalinaPlant Breeding and Acclimatization Institute-National, Research Institute, Młochów Research Center, Platanowa 19, 05-831, Młochów, Poland.
Waldemar MarczewskiPlant Breeding and Acclimatization Institute-National, Research Institute, Młochów Research Center, Platanowa 19, 05-831, Młochów, Poland. w.marczewski@ihar.edu.pl.
Plant Breeding and Acclimatization Institute - National Research Institute · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionWe report the first comparative study of protein expression profiles in tuber sprouts between Katahdin-derived potato cultivars resistant and susceptible to Synchytrium endobioticum. Synchytrium endobioticum causes wart disease in potato (Solanum tuberosum L.) and is considered as the most important quarantine pathogen in almost all countries where potatoes are grown. We performed a comparative analysis of differentially expressed proteins in the tuber sprouts of potato cultivars differing in resistance to pathotype 1(D1) of S. endobioticum using two-dimensional electrophoresis (2-DE) and liquid chromatography-tandem mass spectrometry (LC-MS/MS) approaches. Bulks prepared from two resistant (Calrose and Humalda) and three susceptible (Sebago, Seneca and Wauseon) potato cultivars were studied. When protein profiles were compared between mock- and S. endobioticum-inoculated sprouts, 35 and 63 protein spots, indicating qualitative or quantitative differences, were detected in the resistant and susceptible cultivars, respectively. In turn, 24 proteins associated with resistance to S. endobioticum were revealed by comparison of the resistant and susceptible bulks. These proteins were changed in a constitutive or induced manner and were grouped into four categories: stress and defence, cell structure, protein turnover, and metabolism. Among the 13 proteins classified into the stress and defence group, seven proteins were related to heat-shock proteins (HSPs)/chaperone factors. In addition, four proteins, S-adenosyl-L-homocysteine hydrolase-like, superoxide dismutase [Mn], inactive patatin-3-Kuras 1 and patatin-15, were induced in the resistant bulk; whereas two proteins, patatin-01 and nucleoredoxin 1, showed significant differences in expression between the S. endobioticum-inoculated resistant and susceptible bulks. The detection of such a large number of S. endobioticum-mediated proteins representing the HSP70, HSP60 and HSP20 families suggests their significant role in restricting wart disease in potato tubers.

Indexed as

Chromatography, LiquidDisease ResistancePlant DiseasesProteomicsSolanum tuberosumTandem Mass SpectrometryPotatoProteomic analysisResistance responseWart disease

Identifiers

PMID31776704
OpenAlexW2989682996

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.