Evidence map›Paper›PMID 31776396›Full record

ArticleScientific reports2019

The complete mitochondrial genome of Harpago chiragra and Lambis lambis (Gastropoda: Stromboidea): implications on the Littorinimorpha phylogeny.

Dianhang Jiang, Xiaodong Zheng, Xiaoqi Zeng, Lingfeng Kong, Qi Li

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

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  5. The mitochondrial genome of an Endangered freshwater snailMitochondrial DNA. Part B, Resources · 2021
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  6. The complete mitochondrial genome of an endangered triton snailMitochondrial DNA. Part B, Resources · 2021
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  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Dianhang JiangInstitute of Evolution & Marine Biodiversity (IEMB), Ocean University of China, Qingdao, 266003, China.
Xiaodong ZhengInstitute of Evolution & Marine Biodiversity (IEMB), Ocean University of China, Qingdao, 266003, China. xdzheng@ouc.edu.cn.ORCID http://orcid.org/0000-0003-4052-2324
Xiaoqi ZengInstitute of Evolution & Marine Biodiversity (IEMB), Ocean University of China, Qingdao, 266003, China.
Lingfeng KongKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao, 266003, China.
Qi LiKey Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao, 266003, China.
Ocean University of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The complete mitochondrial genomes of Harpago chiragra and Lambis lambis (Strombidae) were determined with the size of 15,460 bp and 15,481 bp, respectively, and both sequences contained 13 protein-coding genes, 22 tRNAs, and two rRNAs. H. chiragra and L. lambis have similar mitochondrial features, corresponding to typical gastropod mitochondrial genomes, such as the conserved gene order, a high A + T content (66.22% for H. chiragra and 66.10% for L. lambis), and preference for A + T-rich codons. The start or termination codon of same protein-coding gene in H. chiragra was consistent with that in L. lambis, except for the termination codon of cox1 gene (TAG for H. chiragra and TAA for L. lambis) and the start codon of nad4 (GTG for H. chiragra and ATG for L. lambis). Pairwise sequence alignments detected different degrees of variations in H. chiragra and L. lambis mitochondrial genomes; and the two species had lower levels of genetic distance (0.202 for nucleotide sequence) and closest relationships as compared to Strombus gigas and Oncomelania hupensis. The 13 partitioned nucleotide sequences of protein coding genes of H. chiragra and L. lambis were aligned with representatives of the main lineages of gastropods and their phylogenetic relationships were inferred. H. chiragra and L. lambis share the same gene order as Littorinimorpha species, except Vermetoidea, which demonstrate a gene rearrangement in species. The reconstructed phylogeny supports three major clades within Littorinimorpha: 1) Stromboidea, Tonnoidea, Littorinoidea, and Naticoidea, 2) Rissooidea and Truncatelloidea, and 3) Vermetoidea. In addition, a relaxed molecular clock calibrated with fossils dated the diversification of Strombidae near 112 (44-206) Mya and a possible radiation is detected to occur between 45-75 Mya, providing implications to understand the Cenozoic replacement event (65-135 Mya) of Aporrhaidae by Strombidae.

Indexed as

Genome, MitochondrialPhylogenyAnimalsCodon, InitiatorCodon, TerminatorEvolution, MolecularGastropodaGene OrderRNA, TransferSequence AlignmentSequence Analysis, DNACodon, InitiatorCodon, TerminatorRNA, Transfer

Identifiers

PMID31776396
PMCPMC6881320
OpenAlexW2989769305

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.