Evidence map›Paper›PMID 31776339›Full record

ArticleNature communications2019

A cell-free biosynthesis platform for modular construction of protein glycosylation pathways.

Weston Kightlinger, Katherine E Duncker, Ashvita Ramesh, Ariel H Thames, Aravind Natarajan, Jessica C Stark, Allen Yang, Liang Lin, Milan Mrksich, Matthew P DeLisa and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed, 1 pooled it
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 1 synthesis or guideline pooled it, 140 citations in OpenAlex.

  1. Pooled it
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  10. Reconstituting alternative life using the test-bed of cell-free systems.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
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  19. Cell-Free Systems for the Production of Glycoproteins.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Weston KightlingerDepartment of Chemical and Biological Engineering, Northwestern University, 2145 Sheridan Road, Tech E136, Evanston, IL, 60208, USA.ORCID http://orcid.org/0000-0002-5264-4866
Katherine E DunckerDepartment of Biomedical Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL, 60208, USA.ORCID http://orcid.org/0000-0003-4585-5507
Ashvita RameshDepartment of Biomedical Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL, 60208, USA.ORCID http://orcid.org/0000-0002-6468-0709
Ariel H ThamesMedical Scientist Training Program, Feinberg School of Medicine, Northwestern University, Morton Building 1-670, 303 E. Chicago Avenue, Chicago, IL, 60611, USA.ORCID http://orcid.org/0000-0001-5418-6048
Aravind NatarajanDepartment of Microbiology, Cornell University, 123 Wing Drive, Ithaca, NY, 14853, USA.ORCID http://orcid.org/0000-0003-2180-7842
Jessica C StarkDepartment of Chemical and Biological Engineering, Northwestern University, 2145 Sheridan Road, Tech E136, Evanston, IL, 60208, USA.ORCID http://orcid.org/0000-0003-3828-5438
Allen YangDepartment of Biomedical Engineering, Northwestern University, 2145 Sheridan Road, Evanston, IL, 60208, USA.
Liang LinCenter for Synthetic Biology, Northwestern University, 2145 Sheridan Road, Tech B486, Evanston, IL, 60208, USA.ORCID http://orcid.org/0000-0001-6517-769X
Milan MrksichDepartment of Chemical and Biological Engineering, Northwestern University, 2145 Sheridan Road, Tech E136, Evanston, IL, 60208, USA.ORCID http://orcid.org/0000-0002-4964-796X
Matthew P DeLisaDepartment of Microbiology, Cornell University, 123 Wing Drive, Ithaca, NY, 14853, USA.ORCID http://orcid.org/0000-0003-3226-1566
Michael C JewettDepartment of Chemical and Biological Engineering, Northwestern University, 2145 Sheridan Road, Tech E136, Evanston, IL, 60208, USA. m-jewett@northwestern.edu.ORCID http://orcid.org/0000-0003-2948-6211
Northwestern University · USCornell University · US

Funding

ENVIRONMENTAL TOXICOLOGYT32ES007059 · NIEHS · UNIVERSITY OF CALIFORNIA DAVIS · PI Laura S Van Winkle · 1985 to 2026
$7.9M
NIEHS NIH HHS T32 ES007059
6 · The paper itself

Abstract

Glycosylation plays important roles in cellular function and endows protein therapeutics with beneficial properties. However, constructing biosynthetic pathways to study and engineer precise glycan structures on proteins remains a bottleneck. Here, we report a modular, versatile cell-free platform for glycosylation pathway assembly by rapid in vitro mixing and expression (GlycoPRIME). In GlycoPRIME, glycosylation pathways are assembled by mixing-and-matching cell-free synthesized glycosyltransferases that can elaborate a glucose primer installed onto protein targets by an N-glycosyltransferase. We demonstrate GlycoPRIME by constructing 37 putative protein glycosylation pathways, creating 23 unique glycan motifs, 18 of which have not yet been synthesized on proteins. We use selected pathways to synthesize a protein vaccine candidate with an α-galactose adjuvant motif in a one-pot cell-free system and human antibody constant regions with minimal sialic acid motifs in glycoengineered Escherichia coli. We anticipate that these methods and pathways will facilitate glycoscience and make possible new glycoengineering applications.

Indexed as

Antigens, CDbeta-D-Galactoside alpha 2-6-SialyltransferaseCell-Free SystemEscherichia coliGlycoproteinsGlycosylationGlycosyltransferasesHumansMetabolic Networks and PathwaysOligosaccharidesPolysaccharidesProtein EngineeringProteinsSialic AcidsSialyltransferases3'-sialyllactoseAntigens, CDbeta-D-Galactoside alpha 2-6-SialyltransferaseGlycoproteinsGlycosyltransferasesOligosaccharidesPolysaccharidesProteinsSialic AcidsSialyltransferasesST6GAL1 protein, human

Identifiers

PMID31776339
PMCPMC6881289
OpenAlexW2990697904

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.