Evidence map›Paper›PMID 31775848›Full record

ArticleParasites & vectors2019

Genome-wide survey of cytochrome P450 genes in the salmon louse Lepeophtheirus salmonis (Krøyer, 1837).

Joseph L Humble, Greta Carmona-Antoñanzas, Carol M McNair, David R Nelson, David I Bassett, Ingibjørg Egholm, James E Bron, Michaël Bekaert, Armin Sturm

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The P450 genes of the cat flea,Current research in insect science · 2022
    Article
  6. Article
  7. Genomic analysis of the carboxylesterase family in the salmon louse (Lepeophtheirus salmonis).Comparative biochemistry and physiology. Toxicology & pharmacology : CBP · 2021
    Article
  8. Reduced proinsecticide activation by cytochrome P450 confers coumaphos resistance in the major bee parasiteProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Joseph L HumbleInstitute of Aquaculture, University of Stirling, Stirling, FK9 4LA, Scotland, UK.
Greta Carmona-AntoñanzasInstitute of Aquaculture, University of Stirling, Stirling, FK9 4LA, Scotland, UK.
Carol M McNairInstitute of Aquaculture, University of Stirling, Stirling, FK9 4LA, Scotland, UK.
David R NelsonDepartment of Microbiology, University of Tennessee, Memphis, TN, 38163, USA.
David I BassettInstitute of Aquaculture, University of Stirling, Stirling, FK9 4LA, Scotland, UK.
Ingibjørg EgholmInstitute of Aquaculture, University of Stirling, Stirling, FK9 4LA, Scotland, UK.
James E BronInstitute of Aquaculture, University of Stirling, Stirling, FK9 4LA, Scotland, UK.
Michaël BekaertInstitute of Aquaculture, University of Stirling, Stirling, FK9 4LA, Scotland, UK.
Armin SturmInstitute of Aquaculture, University of Stirling, Stirling, FK9 4LA, Scotland, UK. armin.sturm@stir.ac.uk.ORCID http://orcid.org/0000-0003-2632-1999
University of Stirling · GBUniversity of Tennessee Health Science Center · US

Funding

Biotechnology and Biological Sciences Research Council BB/L022923/1Scottish Funding Council HR09011
6 · The paper itself

Abstract

backgroundThe salmon louse (Lepeophtheirus salmonis) infests farmed and wild salmonid fishes, causing considerable economic damage to the salmon farming industry. Infestations of farmed salmon are controlled using a combination of non-medicinal approaches and veterinary drug treatments. While L. salmonis has developed resistance to most available salmon delousing agents, relatively little is known about the molecular mechanisms involved. Members of the cytochrome P450 (CYP) superfamily are typically monooxygenases, some of which are involved in the biosynthesis and metabolism of endogenous compounds, while others have central roles in the detoxification of xenobiotics. In terrestrial arthropods, insecticide resistance can be based on the enhanced expression of CYPs. The reported research aimed to characterise the CYP superfamily in L. salmonis and assess its potential roles in drug resistance.

methodsLepeophtheirus salmonis CYPs were identified by homology searches of the genome and transcriptome of the parasite. CYP transcript abundance in drug susceptible and multi-resistant L. salmonis was assessed by quantitative reverse transcription PCR, taking into account both constitutive expression and expression in parasites exposed to sublethal levels of salmon delousing agents, ecdysteroids and environmental chemicals.

resultsThe above strategy led to the identification of 25 CYP genes/pseudogenes in L. salmonis, making its CYP superfamily the most compact characterised for any arthropod to date. Lepeophtheirus salmonis possesses homologues of a number of arthropod CYP genes with roles in ecdysteroid metabolism, such as the fruit fly genes disembodied, shadow, shade, spook and Cyp18a1. CYP transcript expression did not differ between one drug susceptible and one multi-resistant strain of L. salmonis. Exposure of L. salmonis to emamectin benzoate or deltamethrin caused the transcriptional upregulation of certain CYPs. In contrast, neither ecdysteroid nor benzo[a]pyrene exposure affected CYP transcription significantly.

conclusionsThe parasite L. salmonis is demonstrated to possess the most compact CYP superfamily characterised for any arthropod to date. The complement of CYP genes in L. salmonis includes conserved CYP genes involved in ecdysteroid biosynthesis and metabolism, as well as drug-inducible CYP genes. The present study does not provide evidence for a role of CYP genes in the decreased susceptibility of the multiresistant parasite strain studied.

Indexed as

AnimalsAquacultureCopepodaCytochrome P-450 Enzyme SystemFish DiseasesInsecticide ResistanceInsecticidesNitrilesPyrethrinsSalmonTranscriptomeCytochrome P-450 Enzyme SystemdecamethrinInsecticidesNitrilesPyrethrinsAquacultureCaligidaeCytochrome P450Drug resistanceLepeophtheirus salmonisSalmon farming

Identifiers

PMID31775848
PMCPMC6880348
OpenAlexW2990178452

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.