Evidence map›Paper›PMID 31775614›Full record

ArticleBMC plant biology2019

Is geographical variation driving the transcriptomic responses to multiple stressors in the kelp Saccharina latissima?

Cátia Marina Machado Monteiro, Huiru Li, Kai Bischof, Inka Bartsch, Klaus Ulrich Valentin, Erwan Corre, Jonas Collén, Lars Harms, Gernot Glöckner, Sandra Heinrich

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Article
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  4. Physiological and Molecular Response Mechanisms ofInternational journal of molecular sciences · 2026
    Article
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  7. Northern Norway Sporophytes ofEcology and evolution · 2025
    Article
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  9. Review
  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Cátia Marina Machado MonteiroMarine Botany, Faculty Biology/Chemistry, University of Bremen, Bremen, Germany. monteiro@uni-bremen.de.ORCID http://orcid.org/0000-0002-5392-072X
Huiru LiMarine Botany, Faculty Biology/Chemistry, University of Bremen, Bremen, Germany.
Kai BischofMarine Botany, Faculty Biology/Chemistry, University of Bremen, Bremen, Germany.
Inka BartschAlfred-Wegener-Institute, Helmholtz Centre for Marine and Polar Research, Bremerhaven, Germany.
Klaus Ulrich ValentinAlfred-Wegener-Institute, Helmholtz Centre for Marine and Polar Research, Bremerhaven, Germany.
Erwan CorreStation Biologique de Roscoff, plateforme ABiMS, CNRS: FR2424, Sorbonne Université (UPMC), 29680, Roscoff, France.
Jonas CollénSorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680, Roscoff, France.
Lars HarmsAlfred-Wegener-Institute, Helmholtz Centre for Marine and Polar Research, Bremerhaven, Germany.
Gernot GlöcknerInstitute for Biochemistry I, Medical Faculty, University of Cologne, Cologne, Germany.
Sandra HeinrichInstitute for Plant Science and Microbiology, University of Hamburg, Hamburg, Germany.
Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung · DECentre National de la Recherche Scientifique · FRUniversity of Bremen · DEUniversität Hamburg · DEUniversity of Cologne · DE

Funding

Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research MARES14_09BERA-Net Cofund BiodivERsA 3 program MARFOR ANR-16-EBI3-0005-01Erasmus Mundus - MARES Joint Doctoral Programme on Marine Ecosystem Health and Conservation MARES_14_09
6 · The paper itself

Abstract

backgroundKelps (Laminariales, Phaeophyceae) are brown macroalgae of utmost ecological, and increasingly economic, importance on temperate to polar rocky shores. Omics approaches in brown algae are still scarce and knowledge of their acclimation mechanisms to the changing conditions experienced in coastal environments can benefit from the application of RNA-sequencing. Despite evidence of ecotypic differentiation, transcriptomic responses from distinct geographical locations have, to our knowledge, never been studied in the sugar kelp Saccharina latissima so far.

resultsIn this study we investigated gene expression responses using RNA-sequencing of S. latissima from environments with contrasting temperature and salinity conditions - Roscoff, in temperate eastern Atlantic, and Spitsbergen in the Arctic. Juvenile sporophytes derived from uniparental stock cultures from both locations were pre-cultivated at 8 °C and S

conclusionsOur study reveals interactive effects of temperature and salinity on transcriptomic profiles in S. latissima. Moreover, our data suggest that under identical culture conditions sporophytes from different locations diverge in their transcriptomic responses. This is probably connected to variations in temperature and salinity in their respective environment of origin. The current transcriptomic results support the plastic response pattern in sugar kelp which is a species with several reported ecotypes. Our data provide the baseline for a better understanding of the underlying processes of physiological plasticity and may help in the future to identify strains adapted to specific environments and its genetic control.

Indexed as

Stress, PhysiologicalTranscriptomeAcclimatizationGene Expression ProfilingKelpPhotosynthesisPhylogeographySalinityTemperatureBrown algaeGene expressionGeographical variationRNA-seqSalinity stressTemperature stress

Identifiers

PMID31775614
PMCPMC6881991
OpenAlexW2990482198

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.