ArticleInternational journal of molecular sciences2019
Global Proteomic Analysis Reveals Widespread Lysine Succinylation in Rice Seedlings.
Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.
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Who cites it
7 citing papers in PubMed, 13 citations in OpenAlex.
- Identification of Lysine Succinylome and Acetylome in the Vancomycin-Intermediate Staphylococcus aureus XN108.Microbiology spectrum · 2022Article
- Protein succinylation associated with the progress of hepatocellular carcinoma.Journal of cellular and molecular medicine · 2022Article
- Article
- γ-Aminobutyrate (GABA) Regulated Plant Defense: Mechanisms and Opportunities.Plants (Basel, Switzerland) · 2021Review
- Structure, Biosynthesis, and Biological Activity of Succinylated Forms of Bacteriocin BacSp222.International journal of molecular sciences · 2021Article
- First comprehensive analysis of lysine succinylation in paper mulberry (Broussonetia papyrifera).BMC genomics · 2021Article
- Raman Molecular Fingerprints of Rice Nutritional Quality and the Concept of Raman Barcode.Frontiers in nutrition · 2021Article
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Authors and funding
5 authors at 2 institutions in 2 countries.
Funding
Abstract
Lysine succinylation (Ksu) is a dynamic and reversible post-translational modification that plays an important role in many biological processes. Although recent research has analyzed Ksu plant proteomes, little is known about the scope and cellular distribution of Ksu in rice seedlings. Here, we report high-quality proteome-scale Ksu data for rice seedlings. A total of 710 Ksu sites in 346 proteins with diverse biological functions and subcellular localizations were identified in rice samples. About 54% of the sites were predicted to be localized in the chloroplast. Six putative succinylation motifs were detected. Comparative analysis with succinylation data revealed that arginine (R), located downstream of Ksu sites, is the most conserved amino acid surrounding the succinylated lysine. KEGG pathway category enrichment analysis indicated that carbon metabolism, tricarboxylic acid cycle (TCA) cycle, oxidative phosphorylation, photosynthesis, and glyoxylate and dicarboxylate metabolism pathways were significantly enriched. Additionally, we compared published Ksu data from rice embryos with our data from rice seedlings and found conserved Ksu sites between the two rice tissues. Our in-depth survey of Ksu in rice seedlings provides the foundation for further understanding the biological function of lysine-succinylated proteins in rice growth and development.
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