Evidence map›Paper›PMID 31775037›Full record

ArticleCell reports2019

Differential Functions of Splicing Factors in Mammary Transformation and Breast Cancer Metastasis.

SungHee Park, Mattia Brugiolo, Martin Akerman, Shipra Das, Laura Urbanski, Adam Geier, Anil K Kesarwani, Martin Fan, Nathan Leclair, Kuan-Ting Lin and 6 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 100 citations in OpenAlex.

  1. Article
  2. TargetingGenes & development · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Ultra-Conserved Poison Exons Enable Rapid and Safe Splicing Factor Gene Expression Switches: A Hypothesis.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Research Progress on the Relationship Between PRPF8 and Cancer.Current issues in molecular biology · 2025
    Review
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Mechanisms of RNA alternative splicing dysregulation in triple-negative breast cancer.Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2024
    Review

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

SungHee ParkThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Mattia BrugioloThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Martin AkermanCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA; Envisagenics Inc., New York, NY, USA.
Shipra DasCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Laura UrbanskiThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA; Graduate Program in Genetics and Development, UConn Health, Farmington, CT, USA.
Adam GeierEnvisagenics Inc., New York, NY, USA.
Anil K KesarwaniThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.
Martin FanCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Nathan LeclairThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA; Graduate Program in Genetics and Development, UConn Health, Farmington, CT, USA.
Kuan-Ting LinCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Leo HuCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Ian HuaCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Joshy GeorgeThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA; Institute for Systems Genomics, UConn Health, Farmington, CT, USA.
Senthil K MuthuswamyCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA; Departments of Medicine and Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA, USA.
Adrian R KrainerCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA. Electronic address: krainer@cshl.edu.
Olga AnczukówThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA; Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA; Institute for Systems Genomics, UConn Health, Farmington, CT, USA; Department of Genetics and Genome Sciences, UConn Health, Farmington, CT, USA. Electronic address: olga.anczukow@jax.org.
Cold Spring Harbor Laboratory · USJackson Laboratory · USBeth Israel Deaconess Medical Center · US

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI John Edward Moses · 1987 to 2026
$118.9M
VIRAL TRANSACTIVATIONP01CA013106 · NCI · COLD SPRING HARBOR LABORATORY · PI Camila dos Santos · 1985 to 2026
$116.8M
Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
Role of Splicing Factors in Breast CancerR00CA178206 · NCI · JACKSON LABORATORY · PI ANCZUKOW-CAMARDA, OLGA · 2016 to 2018
$747k
Next Generation DNA SequencerS10OD020122 · OD · COLD SPRING HARBOR LABORATORY · PI MCCOMBIE, WILLIAM RICHARD · 2015 to 2015
$523k
SpliceCore: A cloud-based platform to detect, quantify and interpret alternative splicing variation from next-generation sequencing data.R43GM116478 · NIGMS · ENVISAGENICS, INC. · PI AKERMAN, MARTIN · 2015 to 2015
$225k
NCI NIH HHS P01 CA013106NCI NIH HHS P30 CA034196NCI NIH HHS P30 CA045508NCI NIH HHS R00 CA178206NIGMS NIH HHS R43 GM116478NIH HHS S10 OD020122
6 · The paper itself

Abstract

Misregulation of alternative splicing is a hallmark of human tumors, yet to what extent and how it contributes to malignancy are only beginning to be unraveled. Here, we define which members of the splicing factor SR and SR-like families contribute to breast cancer and uncover differences and redundancies in their targets and biological functions. We identify splicing factors frequently altered in human breast tumors and assay their oncogenic functions using breast organoid models. We demonstrate that not all splicing factors affect mammary tumorigenesis in MCF-10A cells. Specifically, the upregulation of SRSF4, SRSF6, or TRA2β disrupts acinar morphogenesis and promotes cell proliferation and invasion in MCF-10A cells. By characterizing the targets of these oncogenic splicing factors, we identify shared spliced isoforms associated with well-established cancer hallmarks. Finally, we demonstrate that TRA2β is regulated by the MYC oncogene, plays a role in metastasis maintenance in vivo, and its levels correlate with breast cancer patient survival.

Indexed as

Breast NeoplasmsHumansNeoplasm MetastasisRNA SplicingRNA Splicing FactorsRNA Splicing Factorsalternative RNA splicingbreast cancermetastasisMYCsplicing factorSR proteinTRA2-betatriple negative breast cancer

Identifiers

PMID31775037
PMCPMC6936330
OpenAlexW2989877500

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.