Evidence map›Paper›PMID 31774998›Full record

ArticleJournal of agricultural and food chemistry2020

Structural Bases for the Allergenicity of Fra a 1.02 in Strawberry Fruits.

Begoña Orozco-Navarrete, Zuzanna Kaczmarska, Florine Dupeux, María Garrido-Arandia, Delphine Pott, Araceli Díaz Perales, Ana Casañal, José A Márquez, Victoriano Valpuesta, Catharina Merchante

Open access · hybridAbstract read
In one paragraph

Article in Journal of agricultural and food chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. The Structural Flexibility of PR-10 Food Allergens.International journal of molecular sciences · 2022
    Article
  3. Sensitizations to wheat and strawberry: are they a tangible threat to atopic Egyptian.American journal of clinical and experimental immunology · 2022
    Article
  4. Structure and Zeatin Binding of the Peach AllergenJournal of agricultural and food chemistry · 2021
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Begoña Orozco-NavarreteDepartamento de Biología Molecular y Bioquímica, Instituto de Hortofruticultura Subtropical y Mediterránea (IHSM), Universidad de Málaga-CSIC, 29016 Málaga, Spain.ORCID http://orcid.org/0000-0001-8918-4683
Zuzanna KaczmarskaEuropean Molecular Biology Laboratory, 38042 Grenoble, France.
Florine DupeuxEuropean Molecular Biology Laboratory, 38042 Grenoble, France.
María Garrido-ArandiaDepartamento de Biotecnología-Biología Vegetal, Centro de Biotecnología y Genómica de Plantas (CBGP, UPM-INIA), Universidad Politécnica de Madrid, 28040 Madrid, Spain.
Delphine PottDepartamento de Biología Molecular y Bioquímica, Instituto de Hortofruticultura Subtropical y Mediterránea (IHSM), Universidad de Málaga-CSIC, 29016 Málaga, Spain.
Araceli Díaz PeralesDepartamento de Biotecnología-Biología Vegetal, Centro de Biotecnología y Genómica de Plantas (CBGP, UPM-INIA), Universidad Politécnica de Madrid, 28040 Madrid, Spain.
Ana CasañalCambridge Biomedical Campus, Francis Crick Avenue, MRC Laboratory of Molecular Biology, Cambridge CB2 0QH, England.
José A MárquezEuropean Molecular Biology Laboratory, 38042 Grenoble, France.
Victoriano ValpuestaDepartamento de Biología Molecular y Bioquímica, Instituto de Hortofruticultura Subtropical y Mediterránea (IHSM), Universidad de Málaga-CSIC, 29016 Málaga, Spain.ORCID http://orcid.org/0000-0003-0922-6615
Catharina MerchanteDepartamento de Biología Molecular y Bioquímica, Instituto de Hortofruticultura Subtropical y Mediterránea (IHSM), Universidad de Málaga-CSIC, 29016 Málaga, Spain.
Instituto de Hortofruticultura Subtropical y Mediterránea "La Mayora" · ESEuropean Molecular Biology Laboratory · FRCentre for Plant Biotechnology and Genomics · ESMRC Laboratory of Molecular Biology · GB

Funding

Medical Research Council MC_U105192715
6 · The paper itself

Abstract

Although strawberries are highly appreciated fruits, their intake can induce allergic reactions in atopic patients. These reactions can be due to the patient's previous sensitization to the major birch pollen allergen Bet v 1, by which IgE generated in response to Bet v 1 cross-reacts with the structurally related strawberry Fra a 1 protein family. Fra a 1.02 is the most expressed paralog in ripe strawberries and is highly allergenic. To better understand the molecular mechanisms regulating this allergic response, we have determined the three-dimensional structure of Fra a 1.02 and four site-directed mutants that were designed based on their positions in potential epitopes. Fra a 1.02 and mutants conform to the START fold. We show that the cross-reactivity of all the mutant variants to IgE from patients allergic to Bet v 1 was significantly reduced without altering the conserved structural fold, so that they could potentially be used as hypoallergenic Fra a 1 variants for the generation of vaccines against strawberry allergy in atopic patients.

Indexed as

Antigens, PlantCross ReactionsFood HypersensitivityFragariaFruitHumansImmunoglobulin EMolecular Docking SimulationPlant ProteinsAntigens, PlantImmunoglobulin EPlant Proteins3D-structureallergenFra a 1Fragaria x ananassahypoallergenic mutantsIgE bindingPR-10

Identifiers

PMID31774998
PMCPMC7644122
OpenAlexW2989637254

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.