Evidence map›Paper›PMID 31774722›Full record

ArticleMolecular biology of the cell2020

A quantitative single-cell assay for retrograde membrane traffic enables rapid detection of defects in cellular organization.

Phi Luong, Qian Li, Pin-Fang Chen, Paul J Wrighton, Denis Chang, Sean Dwyer, Marie-Theres Bayer, Scott B Snapper, Steen H Hansen, Jay R Thiagarajah and 2 more

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Phi LuongDepartment of Pediatrics, Harvard Medical School, and.
Qian LiDepartment of Pediatrics, Harvard Medical School, and.
Pin-Fang ChenF.M. Kirby Neurobiology Center, Translational Neuroscience Center, Boston Children's Hospital and Harvard Medical School, Boston, MA 02115.
Paul J WrightonDivision of Genetics, Brigham and Women's Hospital and Harvard Medical School, Boston, MA 02115.
Denis ChangDepartment of Pediatrics, Harvard Medical School, and.
Sean DwyerF.M. Kirby Neurobiology Center, Translational Neuroscience Center, Boston Children's Hospital and Harvard Medical School, Boston, MA 02115.
Marie-Theres BayerDepartment of Pediatrics, Harvard Medical School, and.
Scott B SnapperDepartment of Pediatrics, Harvard Medical School, and.
Steen H HansenDepartment of Pediatrics, Harvard Medical School, and.
Jay R ThiagarajahDepartment of Pediatrics, Harvard Medical School, and.
Wolfram GoesslingHarvard Stem Cell Institute, Cambridge, MA 02138.
Wayne I LencerDepartment of Pediatrics, Harvard Medical School, and.

Funding

STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAYNE I LENCER · 1986 to 2026
$32.4M
COngenital Diarrhea and Enteropathy (PediCODE) Consortium and BioRepositoryRC2DK118640 · NIDDK · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI James Richard Goldenring, Izumi Kaji · 2019 to 2026
$14.8M
Mechanism of action for the epithelial-specific ER stress sensor IRE1β in regulating intestinal homeostasis and host defenseR01DK048106 · NIDDK · CHILDREN'S HOSPITAL BOSTON · PI WAYNE I LENCER · 1993 to 2026
$9.6M
Training Program in Newborn and Developmental DiseasesT32HD007466 · NICHD · CHILDREN'S HOSPITAL BOSTON · PI KOUREMBANAS, STELLA · 1994 to 2016
$8.0M
Intestinal Disease-enterocyte toxin interactionR37DK048106 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI LENCER, WAYNE I · 2011 to 2020
$7.0M
A Community Zebrafish Resource for Modeling GWAS BiologyR24OD017870 · OD · BRIGHAM AND WOMEN'S HOSPITAL · PI GOESSLING, WOLFRAM, MACRAE, CALUM A. · 2014 to 2021
$6.3M
Mouse Neurodevelopmental Behavior CoreU54HD090255 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI SAHIN, MUSTAFA · 2016 to 2020
$5.2M
Estrogen Regulation of Hepatic GrowthR01DK090311 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI GOESSLING, WOLFRAM · 2011 to 2020
$4.9M
Metabolic Regulation of Liver GrowthR01DK105198 · NIDDK · BRIGHAM AND WOMEN'S HOSPITAL · PI GOESSLING, WOLFRAM · 2016 to 2020
$2.7M
p190 RhoGAP signaling in epithelial oncogenesisR01CA205158 · NCI · BOSTON CHILDREN'S HOSPITAL · PI HANSEN, STEEN HENNING · 2017 to 2021
$2.0M
FcRn-dependent sorting of IgG and IgG-opsinized antigens by epithelial cellsR01DK084424 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI LENCER, WAYNE I · 2009 to 2013
$1.9M
Aquaporin 3 dependent responses of colon epithelial cells to microbes and injuryK08DK113106 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI THIAGARAJAH, JAY · 2017 to 2020
$648k
NCI NIH HHS R01 CA205158NIAAA NIH HHS F32 AA025271NICHD NIH HHS T32 HD007466NICHD NIH HHS U54 HD090255NIDDK NIH HHS K08 DK113106NIDDK NIH HHS P30 DK034854NIDDK NIH HHS R01 DK048106NIDDK NIH HHS R01 DK084424NIDDK NIH HHS R01 DK090311NIDDK NIH HHS R01 DK105198NIDDK NIH HHS R37 DK048106NIDDK NIH HHS RC2 DK118640NIH HHS R24 OD017870
6 · The paper itself

Abstract

Retrograde membrane trafficking from plasma membrane to Golgi and endoplasmic reticulum typifies one of the key sorting steps emerging from the early endosome that affects cell surface and intracellular protein dynamics underlying cell function. While some cell surface proteins and lipids are known to sort retrograde, there are few effective methods to quantitatively measure the extent or kinetics of these events. Here we took advantage of the well-known retrograde trafficking of cholera toxin and newly defined split fluorescent protein technology to develop a quantitative, sensitive, and effectively real-time single-cell flow cytometry assay for retrograde membrane transport. The approach can be applied in high throughput to elucidate the underlying biology of membrane traffic and how endosomes adapt to the physiologic needs of different cell types and cell states.

Indexed as

Biological AssayBiological TransportCell MembraneCholera ToxinDiseaseEndoplasmic ReticulumFluorescenceHEK293 CellsHumansK562 CellsSingle-Cell AnalysisCholera Toxin

Identifiers

PMID31774722
PMCPMC7202069

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.