Evidence map›Paper›PMID 31774495›Full record

ArticleBlood2020

Gene alterations in epigenetic modifiers and JAK-STAT signaling are frequent in breast implant-associated ALCL.

Camille Laurent, Alina Nicolae, Cécile Laurent, Fabien Le Bras, Corinne Haioun, Virginie Fataccioli, Nadia Amara, José Adélaïde, Arnaud Guille, Jean-Marc Schiano and 25 more

Open access · bronzeAbstract read
In one paragraph

Article in Blood, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed, 2 pooled it
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 2 syntheses or guidelines pooled it, 121 citations in OpenAlex.

  1. Pooled it
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  12. Programmed Death Ligand 1 (PD-L1) Expression in Lymphomas: State of the Art.International journal of molecular sciences · 2024
    Review
  13. Article
  14. An Update on Implant-Associated Malignancies and Their Biocompatibility.International journal of molecular sciences · 2024
    Review
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14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 19 institutions in 3 countries.

Camille LaurentPathology and Cytology Department, Centre Hospitalo-Universitaire de Toulouse,Institut Universitaire du Cancer de Toulouse-Oncopole, Toulouse, France.
Alina NicolaePathology and Cytology Department, Centre Hospitalier Universitaire Hautepierre, Strasbourg, France.
Cécile LaurentInstitut Carnot CALYM, Lymphoma Academic Research Organisation, Institut Carnot, Pierre-Bénite, France.
Fabien Le BrasLymphoid Malignancies Unit, Assistance Publique-Hôpitaux de Paris (AP-HP), Groupe Hospitalier Henri Mondor-Albert Chenevier, Créteil, France.
Corinne HaiounInstitut Mondor de Recherche Biomédicale, INSERM U955, Université Paris-Est, Créteil, France.
Virginie FataccioliInstitut Mondor de Recherche Biomédicale, INSERM U955, Université Paris-Est, Créteil, France.
Nadia AmaraPathology and Cytology Department, Centre Hospitalo-Universitaire de Toulouse,Institut Universitaire du Cancer de Toulouse-Oncopole, Toulouse, France.
José AdélaïdeDepartment of Predictive Oncology, Institut Paoli-Calmettes, and.
Arnaud GuilleDepartment of Predictive Oncology, Institut Paoli-Calmettes, and.
Jean-Marc SchianoDepartment of Hematology, Institut Paoli-Calmettes, Marseille, France.
Bruno TessonInstitut Carnot CALYM, Lymphoma Academic Research Organisation, Institut Carnot, Pierre-Bénite, France.
Alexandra Traverse-GlehenPathology Department, Centre Hospitalier Lyon-Sud, Pierre-Bénite, France.
Marie-Pierre ChenardPathology and Cytology Department, Centre Hospitalier Universitaire Hautepierre, Strasbourg, France.
Lénaïg MescamDepartment of Bio-Pathology Institut Paoli-Calmettes, Marseille, France.
Anne MoreauPathology and Cytology Department, Centre Hospitalier Hôtel Dieu, Nantes, France.
Catherine Chassagne-ClementDepartment of Bio-Pathology Pathology and Cytology Department, Centre Léon Bérard, Lyon, France.
Joan SomjaPathology and Cytology Department, Centre Hospitalo-Universitaire de Liège, Liège, Belgium.
Frédéric EscudiéPathology and Cytology Department, Centre Hospitalo-Universitaire de Toulouse,Institut Universitaire du Cancer de Toulouse-Oncopole, Toulouse, France.
Marc AndréDepartment of Hematology, Centre Hospitalo-Universitaire UCLouvain Namur, Yvoir, Belgium.
Nadine MartinInstitut Mondor de Recherche Biomédicale, INSERM U955, Université Paris-Est, Créteil, France.
Laetitia LacroixInstitut Mondor de Recherche Biomédicale, INSERM U955, Université Paris-Est, Créteil, France.
François LemonnierInstitut Mondor de Recherche Biomédicale, INSERM U955, Université Paris-Est, Créteil, France.
Anne-Sophie HamyCurie Institute, Residual Tumour and Response to Treatment Laboratory, RT2Lab, INSERM, U 932 Immunity and Cancer, Paris, France.
Fabien ReyalCurie Institute, Residual Tumour and Response to Treatment Laboratory, RT2Lab, INSERM, U 932 Immunity and Cancer, Paris, France.
Marie BannierDepartment of Surgery, Institut Paoli-Calmettes, Marseille, France.
Lucie ObericHematology Department and.
Nais PradeLaboratory of Hematology, Centre Hospitalo-Universitaire de Toulouse, Institut Universitaire de Cancérologie de Toulouse, Toulouse, France; and.
François-Xavier FrénoisPathology and Cytology Department, Centre Hospitalo-Universitaire de Toulouse,Institut Universitaire du Cancer de Toulouse-Oncopole, Toulouse, France.
Asma Beldi-FerchiouInstitut Mondor de Recherche Biomédicale, INSERM U955, Université Paris-Est, Créteil, France.
Marie-Helene Delfau-LarueInstitut Mondor de Recherche Biomédicale, INSERM U955, Université Paris-Est, Créteil, France.
Reda BouabdallahDepartment of Hematology, Institut Paoli-Calmettes, Marseille, France.
Daniel BirnbaumDepartment of Predictive Oncology, Institut Paoli-Calmettes, and.
Pierre BroussetPathology and Cytology Department, Centre Hospitalo-Universitaire de Toulouse,Institut Universitaire du Cancer de Toulouse-Oncopole, Toulouse, France.
Luc XerriCentre de Recherche en Cancérologie de Marseille, INSERM U1068, Centre National de la Recherche Scientifique UMR7258, Aix-Marseille University, UM105, Marseille, France.
Philippe GaulardInstitut Mondor de Recherche Biomédicale, INSERM U955, Université Paris-Est, Créteil, France.
Inserm · FRInstitut Paoli-Calmettes · FRInstitut universitaire du cancer de Toulouse Oncopole · FRUniversité Paris-Est Créteil · FRCentre de Recherche des Cordeliers · FRCentre de Recherche en Cancérologie de Marseille · FRCentre Hospitalier Universitaire de Liège · BECentre Hospitalier Universitaire de Nantes · FRCentre Hospitalier Universitaire de Toulouse · FRCentre Hospitalier Universitaire Henri-Mondor · FRCentre Léon Bérard · FRCentre National de la Recherche Scientifique · FRCHU Dinant Godinne UCL Namur · BEHôpital d'Hautepierre · FRHôpitaux Universitaires de Strasbourg · FRHospices Civils de Lyon · FRInstitut Curie · FRInstitut National Polytechnique de Toulouse · FRIslamic University of Gaza · PS

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The oncogenic events involved in breast implant-associated anaplastic large cell lymphoma (BI-ALCL) remain elusive. To clarify this point, we have characterized the genomic landscape of 34 BI-ALCLs (15 tumor and 19 in situ subtypes) collected from 54 BI-ALCL patients diagnosed through the French Lymphopath network. Whole-exome sequencing (n = 22, with paired tumor/germline DNA) and/or targeted deep sequencing (n = 24) showed recurrent mutations of epigenetic modifiers in 74% of cases, involving notably KMT2C (26%), KMT2D (9%), CHD2 (15%), and CREBBP (15%). KMT2D and KMT2C mutations correlated with a loss of H3K4 mono- and trimethylation by immunohistochemistry. Twenty cases (59%) showed mutations in ≥1 member of the JAK/STAT pathway, including STAT3 (38%), JAK1 (18%), and STAT5B (3%), and in negative regulators, including SOCS3 (6%), SOCS1 (3%), and PTPN1 (3%). These mutations were more frequent in tumor-type samples than in situ samples (P = .038). All BI-ALCLs expressed pSTAT3, regardless of the mutational status of genes in the JAK/STAT pathway. Mutations in the EOMES gene (12%) involved in lymphocyte development, PI3K-AKT/mTOR (6%), and loss-of-function mutations in TP53 (12%) were also identified. Copy-number aberration (CNA) analysis identified recurrent alterations, including gains on chromosomes 2, 9p, 12p, and 21 and losses on 4q, 8p, 15, 16, and 20. Regions of CNA encompassed genes involved in the JAK/STAT pathway and epigenetic regulators. Our results show that the BI-ALCL genomic landscape is characterized by not only JAK/STAT activating mutations but also loss-of-function alterations of epigenetic modifiers.

Indexed as

Epigenesis, GeneticSignal TransductionAdultAgedAged, 80 and overBreast ImplantsDNA Copy Number VariationsFemaleGenome, HumanHumansJanus KinasesLymphoma, Large-Cell, AnaplasticMiddle AgedMutationSTAT Transcription FactorsJanus KinasesSTAT Transcription Factors

Identifiers

PMID31774495
PMCPMC7059458
OpenAlexW2990214967

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.