Evidence map›Paper›PMID 31774357›Full record

ArticleJournal of applied physiology (Bethesda, Md. : 1985)2020

lapdMouse: associating lung anatomy with local particle deposition in mice.

Christian Bauer, Melissa Krueger, Wayne J E Lamm, Robb W Glenny, Reinhard R Beichel

Abstract read
In one paragraph

Article in Journal of applied physiology (Bethesda, Md. : 1985), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. The fractal geometry of bronchial trees differs by strain in mice.Journal of applied physiology (Bethesda, Md. : 1985) · 2020
    Article
  9. lapdMouse: a data archive for advancing computational models of inhaled aerosol dosimetry.Journal of applied physiology (Bethesda, Md. : 1985) · 2020
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Christian BauerUniversity of Iowa, Department of Electrical and Computer Engineering, Iowa City, Iowa.
Melissa KruegerDepartment of Medicine, University of Washington School of Medicine, Seattle, Washington.ORCID 0000-0002-6276-3463
Wayne J E LammDepartment of Medicine, University of Washington School of Medicine, Seattle, Washington.
Robb W GlennyDepartments of Medicine and of Physiology and Biophysics, University of Washington School of Medicine, Seattle, Washington.
Reinhard R BeichelUniversity of Iowa, Department of Electrical and Computer Engineering, Iowa City, Iowa.

Funding

Pulmonary Toxicology Facility CoreP30ES005605 · NIEHS · UNIVERSITY OF IOWA · PI Jong Sung Kim · 1990 to 2026
$40.5M
Anatomically derived airway models to facilitate computational toxicology in miceR01ES023863 · NIEHS · UNIVERSITY OF IOWA · PI BEICHEL, REINHARD R., GLENNY, ROBB W · 2015 to 2017
$1.3M
NIEHS NIH HHS P30 ES005605NIEHS NIH HHS R01 ES023863
6 · The paper itself

Abstract

To facilitate computational toxicology, we developed an approach for generating high-resolution lung-anatomy and particle-deposition mouse models. Major processing steps of our method include mouse preparation, serial block-face cryomicrotome imaging, and highly automated image analysis for generating three-dimensional (3D) mesh-based models and volume-based models of lung anatomy (airways, lobes, sublobes, and near-acini structures) that are linked to local particle-deposition measurements. Analysis resulted in 34 mouse models covering 4 different mouse strains (B6C3F1: 8, BALB/C: 11, C57Bl/6: 8, and CD-1: 7) as well as both sexes (16 male and 18 female) and different particle sizes [2 μm (

Indexed as

Administration, InhalationAerosolsModels, BiologicalAnimalsComputer SimulationFemaleHydrodynamicsImage Processing, Computer-AssistedLungMaleMiceMice, Inbred BALB CMice, Inbred C57BLParticle SizeAerosolsaerosol depositionairway geometriesmouse strains

Identifiers

PMID31774357
PMCPMC7052583

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.