Evidence map›Paper›PMID 31773888›Full record

ArticleJournal of the International AIDS Society2019

HIV pretreatment drug resistance among cisgender MSM and transgender women from Lima, Peru.

William L Trebelcock, Javier R Lama, Ann Duerr, Hugo Sanchez, Robinson Cabello, Trupti Gilada, Patricia Segura, Sari L Reisner, Kenneth H Mayer, James Mullins and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of the International AIDS Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Trial
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  3. Analysis of HIV Drug Resistance Mutations Along With Treatment Outcomes of Efavirenz-Based Regimens in Patients With V179D/E Mutations in Guangzhou, China.The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 4 countries.

William L TrebelcockUniversity of Washington, Seattle, WA, USA.ORCID 0000-0003-1356-9178
Javier R LamaAsociación Civil Impacta Salud y Educación, Lima, Perú.
Ann DuerrUniversity of Washington, Seattle, WA, USA.
Hugo SanchezEpicentro, Lima, Perú.
Robinson CabelloAsociación Vía Libre, Lima, Perú.
Trupti GiladaFred Hutchinson Cancer Research Center, Seattle, WA, USA.
Patricia SeguraAsociación Civil Impacta Salud y Educación, Lima, Perú.
Sari L ReisnerHarvard University, Boston, MA, USA.ORCID 0000-0001-7868-4746
Kenneth H MayerHarvard University, Boston, MA, USA.ORCID 0000-0001-7460-733X
James MullinsUniversity of Washington, Seattle, WA, USA.
Rachel A Bender IgnacioUniversity of Washington, Seattle, WA, USA.ORCID 0000-0001-6167-1447
University of Washington · USAsociación Civil Impacta Salud y Educación · PEHarvard University · USEpicentre (South Africa) · ZAFred Hutch Cancer Center · US

Funding

University of Washington/Fred Hutch Center for AIDS ResearchP30AI027757 · NIAID · UNIVERSITY OF WASHINGTON · PI Judith Tsui · 1988 to 2026
$104.9M
Modulating the Impact of Critical Events in Early HIV Infection: Effect of Early ART Initiation and Alcohol UseR01DA040532 · NIDA · FRED HUTCHINSON CANCER RESEARCH CENTER · PI DUERR, ANN C · 2015 to 2019
$8.0M
HIV Testing and Treatment to Prevent Onward HIV Transmission among High-risk MSMR01DA032106 · NIDA · FRED HUTCHINSON CANCER RESEARCH CENTER · PI DUERR, ANN C · 2011 to 2015
$6.6M
Determining the component causes of systemic immune activation that moderate HIV acquisition and establishment of the latent viral reservoirK23AI129659 · NIAID · UNIVERSITY OF WASHINGTON · PI BENDER IGNACIO, RACHEL ANN · 2017 to 2021
$868k
NIAID NIH HHS K23 AI129659NIAID NIH HHS P30 AI027757NIDA NIH HHS R01 DA032106NIDA NIH HHS R01 DA040532
6 · The paper itself

Abstract

introductionTransmitted, or any pretreatment drug resistance (TDR, PDR) can compromise efficacy of first-line antiretroviral therapy (ART). In Peru, genotypic resistance testing is not routinely performed before ART initiation, and estimated PDR prevalence prior to 2012 ranged from 1.0% to 4.7%. We aimed to update estimates of PDR prevalence in men who have sex with men (cis-MSM) and transgender women (TW).

methodsWe obtained HIV sequences from three studies of ART-naïve cisgender-MSM and TW (n = 470) in Lima, Peru from 2013 to 2017, almost two-thirds of whom had acute or recent infections. Sanger sequences of HIV pol were interrogated for surveillance drug resistance mutations (SDRM) using the Stanford Calibrated Population Resistance (CPR) tool and scored for resistance to nucleoside reverse transcriptase inhibitors (NRTIs) and non-nucleoside reverse transcriptase inhibitors (NNRTIs) with the HIVdb programme. We calculated binomial proportions and 95% confidence intervals. χ

resultsSeventy-seven (16.4%) individuals had PDR (95% CI: 13.2 to 20.0); most resistance was likely TDR since 63% were incident infections. SDRM were present in 9.8% (7.3 to 12.9). Resistance to any NRTI was present in <1% of individuals, while efavirenz resistance was present in 10% (6.9% to 12.4%). TW were not statistically more likely than cis-MSM to have PDR (11.4% vs. 9.1%, p = 0.54). Age, incident versus prevalent infection, or residence district did not predict PDR. Prevalence of SDRM increased from 3% in 2013 to 21% 2017 within incident infections (p = 0.04), but not when including prevalent infections.

conclusionsPrevalence of NNRTI resistance in three studies of ART-naïve MSM and TW in Lima, Peru reaches 10%. Because our study reports PDR in a population in which most acquired HIV recently, the overall prevalence of PDR, including previously treated persons, is likely underestimated. These results underscore the need for a nationally representative survey of PDR in Peru and consideration of non-NNRTI anchored first-line ART options. This study also represents the first evaluation of PDR in cis-MSM versus TW in South America, and demonstrates that, although TW are at higher risk of acquiring HIV, they are at similar risk of acquiring a virus with resistance mutations.

Indexed as

Homosexuality, MaleTransgender PersonsAdultAnti-HIV AgentsDrug Resistance, ViralFemaleGenotypeHIV-1HIV InfectionsHumansMaleMiddle AgedMutationPeruPrevalenceReverse Transcriptase InhibitorsAnti-HIV AgentsReverse Transcriptase Inhibitorsdrug resistanceLatin America and the Caribbeanmen who have sex with menPerutransgender people

Identifiers

PMID31773888
PMCPMC6880186
OpenAlexW2990368911

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.