Evidence map›Paper›PMID 31773462›Full record

ArticleJournal of computer-aided molecular design2020

COSMO-RS based predictions for the SAMPL6 logP challenge.

Christoph Loschen, Jens Reinisch, Andreas Klamt

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of computer-aided molecular design, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
  2. Article
  3. Desulfurizative Fluorination of N-CFAngewandte Chemie (International ed. in English) · 2025
    Article
  4. pKJournal of computational chemistry · 2025
    Article
  5. Access toJournal of the American Chemical Society · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Acid Rain and Flue Gas: Quantum Chemical Hydrolysis of NOChemphyschem : a European journal of chemical physics and physical chemistry · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. COSMO-RS predictions of logP in the SAMPL7 blind challenge.Journal of computer-aided molecular design · 2021
    Article
  17. Evaluation of log P, pKJournal of computer-aided molecular design · 2021
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Christoph LoschenDassault Systèmes, BIOVIA, Leverkusen, Germany. christoph.loschen@3ds.com.ORCID 0000-0003-3586-0134
Jens ReinischDassault Systèmes, BIOVIA, Leverkusen, Germany.
Andreas KlamtDassault Systèmes, BIOVIA, Leverkusen, Germany.

Funding

Advancing predictive physical modeling through focused development of model systems to drive new modeling innovationsR01GM124270 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI MOBLEY, DAVID LOWELL · 2018 to 2021
$1.5M
NIGMS NIH HHS R01 GM124270
6 · The paper itself

Abstract

Within the framework of the 6th physical property blind challenge (SAMPL6) the authors have participated in predicting the octanol-water partition coefficients (logP) for several small drug like molecules. Those logP values where experimentally known by the organizers but only revealed after the submissions of the predictions. Two different sets of predictions were submitted by the authors, both based on the COSMOtherm implementation of COSMO-RS theory. COSMOtherm predictions using the FINE parametrization level (hmz0n) obtained the highest accuracy among all submissions as measured by the root mean squared error. COSMOquick predictions using a fast algorithm to estimate σ-profiles and an a posterio machine learning correction on top of the COSMOtherm results (3vqbi) scored 3rd out of 91 submissions. Both results underline the high quality of COSMO-RS derived molecular free energies in solution.

Indexed as

Models, ChemicalThermodynamicsComputer SimulationEntropyOctanolsQuantum TheorySolubilitySolventsWaterOctanolsSolventsWaterCOSMOquickCOSMO-RSCOSMOthermLiquid phase thermodynamicslogPMachine learningOctanol–water partition coefficients

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.