Evidence map›Paper›PMID 31773363›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2020

Genetic diversity of carbapenem-resistant Klebsiella Pneumoniae causing neonatal sepsis in intensive care unit, Cairo, Egypt.

Doaa M Ghaith, Mai Mahmoud Zafer, Halaa Mufeed Said, Sherif Elanwary, Salwa Elsaban, Mohamed Hamed Al-Agamy, Marie Fe F Bohol, Mahmoud Mohamed Bendary, Ahmed Al-Qahtani, Mohammed N Al-Ahdal

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Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 3 pooled it
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 3 syntheses or guidelines pooled it, 61 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Doaa M GhaithDepartment of Clinical and Chemical Pathology, Faculty of Medicine, Cairo University, 1st Al-Saray Street, Al-Manial, Cairo, 11559, Egypt. doaa.ghaith@kasralainy.edu.eg.ORCID http://orcid.org/0000-0002-0846-063X
Mai Mahmoud ZaferDepartment of Microbiology and Immunology, Faculty of Pharmacy, Ahram Canadian University, Giza, Egypt.
Halaa Mufeed SaidDepartment of Pediatrics, Faculty of Medicine, Cairo University, Cairo, Egypt.
Sherif ElanwaryDepartment of Pediatrics, Faculty of Medicine, Cairo University, Cairo, Egypt.
Salwa ElsabanDepartment of Pediatrics, Faculty of Medicine, Cairo University, Cairo, Egypt.
Mohamed Hamed Al-AgamyDepartment of Pharmaceutics, College of Pharmacy, King Saud University, Riyadh, 11451, Saudi Arabia.
Marie Fe F BoholDepartment of Infection and Immunity, Research Center, King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia.
Mahmoud Mohamed BendaryDepartment of Microbiology and Immunology, Faculty of Pharmacy, Port Said University, Port Said Governorate, Egypt.
Ahmed Al-QahtaniDepartment of Infection and Immunity, Research Center, King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia.
Mohammed N Al-AhdalDepartment of Infection and Immunity, Research Center, King Faisal Specialist Hospital and Research Center, Riyadh, Saudi Arabia.
Cairo University · EGKing Faisal Specialist Hospital & Research Centre · SAAhram Canadian University · EGAl-Azhar University · EGPort Said University · EG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Neonatal sepsis is a great challenge for clinicians and infection control practitioners, especially in facilities with limited resources. Carbapenem-resistant Klebsiella pneumoniae (CRKP) is rapidly increasing and carriages a major threat to neonates. We aimed to examine phenotypes causing neonatal late onset sepsis (NLOS) in comparison with neonatal early onset sepsis (NEOS) with further investigations of genotypes, and genetic relatedness of CRKP in neonatal late-onset sepsis. Our study included 88 neonates diagnosed with sepsis: 58 with (NLOS) and 30 with (NEOS) from November 2015 to April 2016, at neonatal intensive care unit (NICU) of Cairo University Hospital. K. pneumoniae was the most common encountered pathogen in the NLOS group (37.9%) with a mean sepsis score of 6.39 when compared to the NEOS group (p < 0.05). In Klebsiella group, C-reactive protein and interleukin-6 levels were significantly high (p ˂ 0.001) and 56.5% of the isolates were meropenem resistant. The most prevalent carbapenemase gene was OXA-48 which was identified in 14/23 (60.8%) followed by NDM-1 which was identified in 12/23 (52.2%) as detected by multiplex PCR. Coexistence of both carbapenemases was found in 52.2% (12/23). The bla

Indexed as

Genetic VariationIntensive Care Units, NeonatalAnti-Bacterial AgentsBacterial Typing TechniquesCarbapenem-Resistant EnterobacteriaceaeCross-Sectional StudiesEgyptHumansInfant, NewbornKlebsiella InfectionsKlebsiella pneumoniaeMicrobial Sensitivity TestsNeonatal SepsisPrognosisPublic Health SurveillanceTreatment OutcomeAnti-Bacterial AgentsCarbapenemasesCarbapenem-resistant Klebsiella pneumoniaeNDMNeonatal sepsisOXA-48

Identifiers

PMID31773363
OpenAlexW2989659261

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.