Evidence map›Paper›PMID 31773361›Full record

ArticleCellular and molecular neurobiology2020

Genetic Predisposition to Glioma Mediated by a MAPKAP1 Enhancer Variant.

Liming Huang, Wenshen Xu, Danfang Yan, Xin You, Xi Shi, Shu Zhang, Hualan Hong, Lian Dai

Open access · greenAbstract read
In one paragraph

Article in Cellular and molecular neurobiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Liming HuangDepartment of Medical Oncology (39th Section), The First Affiliated Hospital, Fujian Medical University, Fuzhou, 350005, China. huangliming331@163.com.ORCID http://orcid.org/0000-0002-7478-0308
Wenshen XuDepartment of Laboratory Medicine, The First Affiliated Hospital, Fujian Medical University, Fuzhou, 350005, China.
Danfang YanDepartment of Radiation Oncology, The First Affiliated Hospital, Zhejiang University, Hangzhou, 310003, China.
Xin YouDepartment of Medical Oncology (39th Section), The First Affiliated Hospital, Fujian Medical University, Fuzhou, 350005, China.
Xi ShiDepartment of Medical Oncology (39th Section), The First Affiliated Hospital, Fujian Medical University, Fuzhou, 350005, China.
Shu ZhangDepartment of Medical Oncology (39th Section), The First Affiliated Hospital, Fujian Medical University, Fuzhou, 350005, China.
Hualan HongDepartment of Medical Oncology (39th Section), The First Affiliated Hospital, Fujian Medical University, Fuzhou, 350005, China.
Lian DaiDepartment of Medicine, The Third Affiliated People's Hospital, Fujian University of Traditional Chinese Medicine, Fuzhou, 350108, China. dailianarticle@163.com.
Fujian Medical University · CNFirst Affiliated Hospital Zhejiang University · CNFujian University of Traditional Chinese Medicine · CN

Funding

Joint Funds for the Innovation of Science and Technology of Fujian province 2016Y9016National Natural Science Foundation of China 81301772Natural Science Foundation of Fujian Province 2014J05087Startup Fund for Scientific Research of Fujian Medical University 2017XQ1085
6 · The paper itself

Abstract

Mitogen-activated protein kinase-associated protein 1 (MAPKAP1) is a unique component of the mechanistic target of rapamycin (MTOR) pathway which plays a pivotal role in carcinogenesis. The role of enhancer variant in carcinogenesis receives increased attentions. However, the significance of enhancer variants of MAPKAP1 in glioma has not yet been investigated. The associations of enhancer variants of MAPKAP1 with glioma susceptibility were evaluated in a cohort of 400 glioma patients and 651 controls. The function of glioma susceptibility locus was examined by a set of biochemical assays. We found that an enhancer variant of MAPKAP1 rs473426 was associated with a significantly increased risk of glioma in a dominant manner (OR 1.53, 95% CI 1.13-2.06; P = 0.006). The association for rs1339499 located in the same enhancer approached the borderline of significance after multiple testing correction (OR 0.74, 95% CI 0.56-0.98; P = 0.037). Furthermore, cumulative associations of rs473426 and rs1339499 with glioma risk were observed (P = 0.011). Functional analyses showed that the risk allele rs473426 C downregulated the regulatory activity of enhancer by reducing the binding affinity of a transcriptional activator NFΙC, which resulted in lower gene expression both in vitro and in vivo. These results demonstrate for the first time that enhancer variant of MAPKAP1 confers susceptibility to glioma by downregulation of MAPKAP1 expression, and provide further evidence highlighting MAPKAP1 as a cancer suppressor in glioma carcinogenesis.

Indexed as

Genetic Predisposition to DiseaseAdaptor Proteins, Signal TransducingAllelesBase SequenceBrain NeoplasmsCase-Control StudiesCell Line, TumorEnhancer Elements, GeneticFemaleGene FrequencyGliomaHumansLuciferasesMaleMiddle AgedPolymorphism, Single NucleotideAdaptor Proteins, Signal TransducingLuciferasesMAPKAP1 protein, humanEnhancerGenetic variationGliomaMAPKAP1Susceptibility

Identifiers

PMID31773361
PMCPMC11448947
OpenAlexW2989848239

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.