Evidence map›Paper›PMID 31773147›Full record

ArticleAnnals of botany2020

Three-dimensional ultrastructural change of chloroplasts in rice mesophyll cells responding to salt stress.

Takao Oi, Sakiko Enomoto, Tomoyo Nakao, Shigeo Arai, Koji Yamane, Mitsutaka Taniguchi

Open access · bronzeAbstract read
In one paragraph

Article in Annals of botany, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 40 citations in OpenAlex.

  1. 3D Reconstruction of MatureBio-protocol · 2026
    Article
  2. A KRice (New York, N.Y.) · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. How Plants Tolerate Salt Stress.Current issues in molecular biology · 2023
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Takao OiGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan.
Sakiko EnomotoHigh Voltage Electron Microscope Laboratory, Institute of Materials and Systems for Sustainability, Nagoya University, Nagoya, Japan.
Tomoyo NakaoHigh Voltage Electron Microscope Laboratory, Institute of Materials and Systems for Sustainability, Nagoya University, Nagoya, Japan.
Shigeo AraiHigh Voltage Electron Microscope Laboratory, Institute of Materials and Systems for Sustainability, Nagoya University, Nagoya, Japan.
Koji YamaneGraduate School of Agriculture, Kindai University, Nara, Japan.
Mitsutaka TaniguchiGraduate School of Bioagricultural Sciences, Nagoya University, Nagoya, Japan.
Nagoya University · JPKindai University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsExcess salinity inhibits the metabolism of various systems and induces structural changes, especially in chloroplasts. Although the chloroplast body seems to swell under salinity stress as observed by conventional transmission electron microscopy, previous studies are limited to 2-D data and lack quantitative comparisons because specimens need to be sliced into ultrathin sections. This study shows three-dimensionally the structural changes in a whole mesophyll cell responding to salinity stress by serial sectioning with a focused ion beam scanning electron microscope (FIB-SEM) and compares the differences in chloroplast structures based on reconstructed models possessing accurate numerical voxel values.

methodsLeaf blades of rice plants treated with 100 mm NaCl or without (control) for 4 d were fixed chemically and embedded in resin. The specimen blocks were sectioned and observed using the FIB-SEM, and then the sliced image stacks were reconstructed into 3-D models by image processing software. KEY

resultsOn the transverse sections of rice mesophyll cells, the chloroplasts in the control leaves appeared to be elongated meniscus lens shaped, while those in the salt-treated leaves appear to be expanded oval shaped. The 3-D models based on serial sectioning images showed that the chloroplasts in the control cells spread like sheets fitted to the shape of the cell wall and in close contact with the adjacent chloroplasts. In contrast, those in the salt-stressed cells curled up into a ball and fitted to cell protuberances without being in close contact with adjacent chloroplasts. Although the shapes of chloroplasts were clearly different between the two treatments, their volumes did not differ.

conclusionsThe 3-D reconstructed models of whole rice mesophyll cells indicated that chloroplasts under salt stress conditions were not swollen but became spherical without increasing their volume. This is in contrast to findings of previous studies based on 2-D images.

Indexed as

OryzaChloroplastsMesophyll CellsPlant LeavesSalt StressChloroplastchloroplast protrusionfocused ion beam scanning electron microscopemesophyll cellOryza sativa Lsalt stressthree-dimensional reconstructiontransmission electron microscopeultrastructure

Identifiers

PMID31773147
PMCPMC7182591
OpenAlexW2989909254

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.