Evidence map›Paper›PMID 31772323›Full record

ArticleMucosal immunology2020

Commensal microbiota drive the functional diversification of colon macrophages.

Byunghyun Kang, Luigi J Alvarado, Teayong Kim, Michael L Lehmann, Hyeseon Cho, Jianping He, Peng Li, Bong-Hyun Kim, Andre Larochelle, Brian L Kelsall

Open access · hybridAbstract read
In one paragraph

Article in Mucosal immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 117 citations in OpenAlex.

  1. Article
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  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Gut microbes · 2025
    Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Review
  18. Article
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  20. Review

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Byunghyun KangNational Institute of Allergy and Infectious Diseases, Lung and Blood Institute, NIH, Bethesda, MD, 20892, USA.
Luigi J AlvaradoNational Heart, Lung and Blood Institute, NIH, Bethesda, MD, 20892, USA.
Teayong KimSan Diego State University, 5500 Campanile Dr., San Diego, CA, 92182, USA.
Michael L LehmannNational Institute of Mental Health, NIH, Bethesda, MD, 20814, USA.
Hyeseon ChoNational Institute of Allergy and Infectious Diseases, Lung and Blood Institute, NIH, Bethesda, MD, 20892, USA.
Jianping HeNational Institute of Allergy and Infectious Diseases, Lung and Blood Institute, NIH, Bethesda, MD, 20892, USA.
Peng LiNational Heart, Lung and Blood Institute, NIH, Bethesda, MD, 20892, USA.
Bong-Hyun KimNational Laboratory of Cancer Research, NIH, Frederick, MD, 21702, USA.
Andre LarochelleNational Heart, Lung and Blood Institute, NIH, Bethesda, MD, 20892, USA.
Brian L KelsallNational Institute of Allergy and Infectious Diseases, Lung and Blood Institute, NIH, Bethesda, MD, 20892, USA. bkelsall@niaid.nih.gov.
National Heart Lung and Blood Institute · USNational Institute of Allergy and Infectious Diseases · USFrederick National Laboratory for Cancer Research · USNational Institute of Mental Health · USSan Diego State University · US

Funding

Antigen Processing And Presentation In The IntestineZIAAI000833 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI KELSALL, BRIAN · 2009 to 2025
$24.9M
ANTIGEN PROCESSING AND PRESENTATION IN THE INTESTINEZ01AI000833 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI KELSALL, BRIAN · 1998 to 2008
$3.0M
Intramural NIH HHS Z01 AI000833
6 · The paper itself

Abstract

Mononuclear phagocytes are a heterogeneous population of leukocytes essential for immune homeostasis that develop tissue-specific functions due to unique transcriptional programs driven by local microenvironmental cues. Single cell RNA sequencing (scRNA-seq) of colonic myeloid cells from specific pathogen free (SPF) and germ-free (GF) C57BL/6 mice revealed extensive heterogeneity of both colon macrophages (MPs) and dendritic cells (DCs). Modeling of developmental pathways combined with inference of gene regulatory networks indicate two major trajectories from common CCR2

Indexed as

AnimalsCD11c AntigenCell DifferentiationCells, CulturedColonDendritic CellsGene OntologyGene Regulatory NetworksHomeostasisLectins, C-TypeMacrophagesMannose-Binding LectinsMannose ReceptorMiceMice, Inbred C57BLMice, KnockoutCD11c AntigenLectins, C-TypeMannose-Binding LectinsMannose ReceptorReceptors, Cell Surface

Identifiers

PMID31772323
PMCPMC7039809
OpenAlexW2991429913

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.