Evidence map›Paper›PMID 31772294›Full record

ArticleScientific reports2019

Novel redox-active enzymes for ligninolytic applications revealed from multiomics analyses of Peniophora sp. CBMAI 1063, a laccase hyper-producer strain.

Lívia B Brenelli, Gabriela F Persinoti, João Paulo L Franco Cairo, Marcelo V Liberato, Thiago Augusto Gonçalves, Igor V R Otero, Pedro H Mainardi, Claus Felby, Lara D Sette, Fabio M Squina

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Fungi from Antarctic marine sediment: characterization and assessment for textile dye decolorization and detoxification.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  4. Article
  5. Comparative Analysis ofInternational journal of molecular sciences · 2022
    Article
  6. Review
  7. Review
  8. Review
  9. Article
  10. Comparative Genomics: Insights on the Pathogenicity and Lifestyle ofInternational journal of molecular sciences · 2021
    Article
  11. Article
  12. Purification and Characterization of Two Novel Laccases fromJournal of fungi (Basel, Switzerland) · 2020
    Article
  13. Harnessing the sponge microbiome for industrial biocatalysts.Applied microbiology and biotechnology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Lívia B BrenelliBrazilian Biorenewables National Laboratory (LNBR), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, Brazil.
Gabriela F PersinotiBrazilian Biorenewables National Laboratory (LNBR), Brazilian Center for Research in Energy and Materials (CNPEM), Campinas, Brazil.ORCID http://orcid.org/0000-0002-0975-7283
João Paulo L Franco CairoPrograma de Processos Tecnológicos e Ambientais, Universidade de Sorocaba (UNISO), Sorocaba, Brazil.
Marcelo V LiberatoPrograma de Processos Tecnológicos e Ambientais, Universidade de Sorocaba (UNISO), Sorocaba, Brazil.
Thiago Augusto GonçalvesPrograma de Processos Tecnológicos e Ambientais, Universidade de Sorocaba (UNISO), Sorocaba, Brazil.
Igor V R OteroUniversidade Estadual Paulista (UNESP), Instituto de Biociências, Rio Claro, Brazil.
Pedro H MainardiUniversidade Estadual Paulista (UNESP), Instituto de Biociências, Rio Claro, Brazil.
Claus FelbyUniversity of Copenhagen, Faculty of Science, Department of Geosciences and Natural Resource Management, Frederiksberg C, Denmark.
Lara D SetteUniversidade Estadual Paulista (UNESP), Instituto de Biociências, Rio Claro, Brazil.ORCID http://orcid.org/0000-0002-5980-3786
Fabio M SquinaPrograma de Processos Tecnológicos e Ambientais, Universidade de Sorocaba (UNISO), Sorocaba, Brazil. fabio.squina@gmail.com.
Universidade Estadual Paulista (Unesp) · BRUniversidade de Sorocaba · BRUniversidade Estadual de Campinas (UNICAMP) · BRUniversity of Copenhagen · DKBrazilian Center for Research in Energy and Materials · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The repertoire of redox-active enzymes produced by the marine fungus Peniophora sp. CBMAI 1063, a laccase hyper-producer strain, was characterized by omics analyses. The genome revealed 309 Carbohydrate-Active Enzymes (CAZymes) genes, including 48 predicted genes related to the modification and degradation of lignin, whith 303 being transcribed under cultivation in optimized saline conditions for laccase production. The secretome confirmed that the fungus can produce a versatile ligninolytic enzyme cocktail. It secretes 56 CAZymes, including 11 oxidative enzymes classified as members of auxiliary activity families (AAs), comprising two laccases, Pnh_Lac1 and Pnh_Lac2, the first is the major secretory protein of the fungi. The Pnh_Lac1-mediator system was able to promote the depolymerization of lignin fragments and polymeric lignin removal from pretreated sugarcane bagasse, confirming viability of this fungus enzymatic system for lignocellulose-based bioproducts applications.

Indexed as

Oxidation-ReductionBasidiomycotaDNA, FungalGenes, FungalGenome, FungalLaccaseLigninPhylogenyDNA, FungalLaccaseLignin

Identifiers

PMID31772294
PMCPMC6879535
OpenAlexW2989954252

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.