Evidence map›Paper›PMID 31772204›Full record

ArticleNature communications2019

The in vivo ISGylome links ISG15 to metabolic pathways and autophagy upon Listeria monocytogenes infection.

Yifeng Zhang, Fabien Thery, Nicholas C Wu, Emma K Luhmann, Olivier Dussurget, Mariko Foecke, Clara Bredow, Daniel Jiménez-Fernández, Kevin Leandro, Antje Beling and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
7.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 96 citations in OpenAlex.

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  16. When ISG15 is involved in inflammation.Frontiers in immunology · 2026
    Review
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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 4 countries.

Yifeng ZhangDepartment of Microbiology and Immunology, University of Iowa Carver College of Medicine, Iowa City, IA, 52242, USA.ORCID http://orcid.org/0000-0002-7348-0223
Fabien TheryCenter for Medical Biotechnology, VIB, 9000, Gent, Belgium.
Nicholas C WuDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA, 92037, USA.ORCID http://orcid.org/0000-0002-9078-6697
Emma K LuhmannDepartment of Microbiology and Immunology, University of Iowa Carver College of Medicine, Iowa City, IA, 52242, USA.ORCID http://orcid.org/0000-0002-4017-9805
Olivier DussurgetInstitut Pasteur, Unité des Interactions Bactéries-Cellules, Département de Biologie Cellulaire et Infection, 75015, Paris, France.ORCID http://orcid.org/0000-0001-9924-0837
Mariko FoeckeInstitut Pasteur, Unité des Interactions Bactéries-Cellules, Département de Biologie Cellulaire et Infection, 75015, Paris, France.ORCID http://orcid.org/0000-0002-9205-940X
Clara BredowCharité-Universitäts medizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health (BIH), Institute of Biochemistry, Berlin, Germany.
Daniel Jiménez-FernándezInstitute of Neuropathology, Medical Faculty, University of Freiburg, Freiburg, Germany.ORCID http://orcid.org/0000-0002-9298-7150
Kevin LeandroCenter for Medical Biotechnology, VIB, 9000, Gent, Belgium.
Antje BelingCharité-Universitäts medizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health (BIH), Institute of Biochemistry, Berlin, Germany.ORCID http://orcid.org/0000-0002-1826-5248
Klaus-Peter KnobelochInstitute of Neuropathology, Medical Faculty, University of Freiburg, Freiburg, Germany.ORCID http://orcid.org/0000-0003-1587-1944
Francis ImpensCenter for Medical Biotechnology, VIB, 9000, Gent, Belgium. francis.impens@vib-ugent.be.ORCID http://orcid.org/0000-0003-2886-9616
Pascale CossartInstitut Pasteur, Unité des Interactions Bactéries-Cellules, Département de Biologie Cellulaire et Infection, 75015, Paris, France. pascale.cossart@pasteur.fr.
Lilliana RadoshevichDepartment of Microbiology and Immunology, University of Iowa Carver College of Medicine, Iowa City, IA, 52242, USA. lilliana-radoshevich@uiowa.edu.ORCID http://orcid.org/0000-0003-0294-9300
Ghent University · BEInserm · FRUniversity of Iowa · USHumboldt-Universität zu Berlin · DEUniversity of Freiburg · DEScripps Research Institute · US

Funding

Discovery of Novel Mechanisms of Action of Ubiquitin-Like Proteins in Cellular Stress PathwaysR35GM137961 · NIGMS · UNIVERSITY OF IOWA · PI Lilliana RADOSHEVICH · 2020 to 2026
$2.8M
NIGMS NIH HHS R35 GM137961
6 · The paper itself

Abstract

ISG15 is an interferon-stimulated, ubiquitin-like protein, with anti-viral and anti-bacterial activity. Here, we map the endogenous in vivo ISGylome in the liver following Listeria monocytogenes infection by combining murine models of reduced or enhanced ISGylation with quantitative proteomics. Our method identifies 930 ISG15 sites in 434 proteins and also detects changes in the host ubiquitylome. The ISGylated targets are enriched in proteins which alter cellular metabolic processes, including upstream modulators of the catabolic and antibacterial pathway of autophagy. Computational analysis of substrate structures reveals that a number of ISG15 modifications occur at catalytic sites or dimerization interfaces of enzymes. Finally, we demonstrate that animals and cells with enhanced ISGylation have increased basal and infection-induced autophagy through the modification of mTOR, WIPI2, AMBRA1, and RAB7. Taken together, these findings ascribe a role of ISGylation to temporally reprogram organismal metabolism following infection through direct modification of a subset of enzymes in the liver.

Indexed as

AcetylationAnimalsAutophagyCytokinesListeria monocytogenesListeriosisLiverLysineMetabolic Networks and PathwaysMice, Inbred C57BLMice, Mutant StrainsMitochondrial ProteinsProtein Processing, Post-TranslationalTOR Serine-Threonine KinasesUbiquitinationUbiquitinsCytokinesG1p2 protein, mouseLysineMitochondrial ProteinsmTOR protein, mouseTOR Serine-Threonine KinasesUbiquitins

Identifiers

PMID31772204
PMCPMC6879477
OpenAlexW2989812867

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.